Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN3P54252 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN3P54252 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.36■□□□□ 0.85
ATXN3P54252 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.36■□□□□ 0.85
ATXN3P54252 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.36■□□□□ 0.85
ATXN3P54252 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ATXN3P54252 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ATXN3P54252 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.36■□□□□ 0.85
ATXN3P54252 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ATXN3P54252 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 AC007322.3-201ENST00000426526 701 ntBASIC20.36■□□□□ 0.85
ATXN3P54252 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.36■□□□□ 0.85
ATXN3P54252 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.36■□□□□ 0.85
ATXN3P54252 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ATXN3P54252 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.36■□□□□ 0.85
ATXN3P54252 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.36■□□□□ 0.85
ATXN3P54252 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.36■□□□□ 0.85
ATXN3P54252 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.36■□□□□ 0.85
ATXN3P54252 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
ATXN3P54252 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.36■□□□□ 0.85
ATXN3P54252 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN3P54252 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.36■□□□□ 0.85
ATXN3P54252 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.36■□□□□ 0.85
ATXN3P54252 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATXN3P54252 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATXN3P54252 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATXN3P54252 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATXN3P54252 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
ATXN3P54252 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATXN3P54252 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATXN3P54252 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.35■□□□□ 0.85
ATXN3P54252 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.35■□□□□ 0.85
ATXN3P54252 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
ATXN3P54252 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
ATXN3P54252 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ATXN3P54252 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ATXN3P54252 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATXN3P54252 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATXN3P54252 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATXN3P54252 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ATXN3P54252 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATXN3P54252 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATXN3P54252 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATXN3P54252 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.35■□□□□ 0.85
ATXN3P54252 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.35■□□□□ 0.85
ATXN3P54252 AP001412.1-201ENST00000608405 714 ntBASIC20.35■□□□□ 0.85
ATXN3P54252 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.35■□□□□ 0.85
ATXN3P54252 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.34■□□□□ 0.85
ATXN3P54252 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.34■□□□□ 0.85
ATXN3P54252 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
ATXN3P54252 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.34■□□□□ 0.85
ATXN3P54252 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
ATXN3P54252 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATXN3P54252 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.34■□□□□ 0.85
ATXN3P54252 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATXN3P54252 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.34■□□□□ 0.85
ATXN3P54252 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.34■□□□□ 0.85
ATXN3P54252 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATXN3P54252 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.34■□□□□ 0.85
ATXN3P54252 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.34■□□□□ 0.85
ATXN3P54252 BX088651.1-201ENST00000540551 451 ntBASIC20.34■□□□□ 0.85
ATXN3P54252 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATXN3P54252 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
ATXN3P54252 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.34■□□□□ 0.85
ATXN3P54252 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATXN3P54252 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATXN3P54252 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATXN3P54252 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATXN3P54252 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.33■□□□□ 0.85
ATXN3P54252 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATXN3P54252 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
ATXN3P54252 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATXN3P54252 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.33■□□□□ 0.85
ATXN3P54252 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.33■□□□□ 0.85
ATXN3P54252 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATXN3P54252 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.33■□□□□ 0.85
ATXN3P54252 AC012618.2-201ENST00000428058 849 ntBASIC20.33■□□□□ 0.85
ATXN3P54252 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.33■□□□□ 0.85
ATXN3P54252 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.33■□□□□ 0.85
ATXN3P54252 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.33■□□□□ 0.85
ATXN3P54252 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATXN3P54252 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATXN3P54252 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATXN3P54252 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.33■□□□□ 0.84
ATXN3P54252 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATXN3P54252 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms