Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.942e-6■■■□□ 18.2
SUB1P53999 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.862e-6■■■□□ 18.2
SUB1P53999 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.752e-6■■■□□ 18.2
SUB1P53999 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.62■□□□□ 0.732e-6■■■□□ 18.2
SUB1P53999 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.69■□□□□ 0.582e-6■■■□□ 18.2
SUB1P53999 CAPNS1-209ENST00000590049 592 ntAPPRIS ALT2 TSL 58.98□□□□□ -0.972e-6■■■□□ 18.2
SUB1P53999 CAPNS1-210ENST00000590211 403 ntTSL 53.15□□□□□ -1.912e-6■■■□□ 18.2
SUB1P53999 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC10.32□□□□□ -0.763e-11■■■□□ 18.2
SUB1P53999 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC10.32□□□□□ -0.763e-11■■■□□ 18.2
SUB1P53999 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC8.84□□□□□ -0.993e-11■■■□□ 18.2
SUB1P53999 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC8.67□□□□□ -1.023e-11■■■□□ 18.2
SUB1P53999 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC6.12□□□□□ -1.433e-11■■■□□ 18.2
SUB1P53999 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.473e-11■■■□□ 18.2
SUB1P53999 RPS7-207ENST00000479123 511 ntTSL 1 (best)12.35□□□□□ -0.432e-8■■■□□ 18.2
SUB1P53999 HSPD1-214ENST00000491249 860 ntTSL 26□□□□□ -1.456e-11■■■□□ 18.2
SUB1P53999 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.743e-6■■■□□ 18.2
SUB1P53999 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.743e-6■■■□□ 18.2
SUB1P53999 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.863e-6■■■□□ 18.2
SUB1P53999 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.47■□□□□ 0.554e-8■■■□□ 18.2
SUB1P53999 PLEKHJ1-209ENST00000588545 889 ntTSL 216.68■□□□□ 0.264e-8■■■□□ 18.2
SUB1P53999 SSR3-202ENST00000463503 596 ntTSL 4 BASIC8.5□□□□□ -1.057e-10■■■□□ 18.2
SUB1P53999 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.74□□□□□ -1.817e-10■■■□□ 18.2
SUB1P53999 SSR3-204ENST00000467733 873 ntTSL 22.7□□□□□ -1.987e-10■■■□□ 18.2
SUB1P53999 RPL10A-204ENST00000478340 962 ntTSL 213.72□□□□□ -0.211e-11■■■□□ 18.2
SUB1P53999 RPL10A-205ENST00000490335 632 ntTSL 212.38□□□□□ -0.431e-11■■■□□ 18.2
SUB1P53999 RPL10A-203ENST00000467020 1069 ntTSL 311.45□□□□□ -0.581e-11■■■□□ 18.2
SUB1P53999 RPL10A-202ENST00000464112 1063 ntTSL 1 (best)9.54□□□□□ -0.881e-11■■■□□ 18.2
SUB1P53999 RPL10A-201ENST00000322203 716 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -11e-11■■■□□ 18.2
SUB1P53999 TCP1-218ENST00000546204 566 ntTSL 27.21□□□□□ -1.261e-6■■■□□ 18.2
SUB1P53999 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.45e-7■■■□□ 18.1
SUB1P53999 YARS-209ENST00000490826 2178 ntTSL 210.69□□□□□ -0.75e-7■■■□□ 18.1
SUB1P53999 YARS-203ENST00000469100 2247 ntTSL 28.52□□□□□ -1.055e-7■■■□□ 18.1
SUB1P53999 CTBP1-204ENST00000503594 1108 ntTSL 213.41□□□□□ -0.263e-6■■■□□ 18.1
SUB1P53999 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.131e-11■■■□□ 18.1
SUB1P53999 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.921e-6■■■□□ 18.1
SUB1P53999 NOP53-204ENST00000595143 810 ntTSL 515.06■□□□□ 01e-6■■■□□ 18.1
SUB1P53999 NOP53-212ENST00000600410 4185 ntTSL 214.26□□□□□ -0.131e-6■■■□□ 18.1
SUB1P53999 NOP53-205ENST00000597985 656 ntTSL 310.99□□□□□ -0.651e-6■■■□□ 18.1
SUB1P53999 NOP53-202ENST00000594182 303 ntTSL 310.69□□□□□ -0.71e-6■■■□□ 18.1
SUB1P53999 NOP53-206ENST00000598285 265 ntTSL 210.03□□□□□ -0.81e-6■■■□□ 18.1
SUB1P53999 NOP53-208ENST00000598959 501 ntTSL 57.36□□□□□ -1.231e-6■■■□□ 18.1
SUB1P53999 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.292e-7■■■□□ 18.1
SUB1P53999 SSR2-207ENST00000473699 1027 ntTSL 311.88□□□□□ -0.512e-7■■■□□ 18.1
SUB1P53999 LYZ-201ENST00000261267 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.291e-6■■■□□ 18.1
SUB1P53999 MRPS16-204ENST00000473427 612 ntTSL 314.2□□□□□ -0.141e-13■■■□□ 18.1
SUB1P53999 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.57□□□□□ -0.41e-13■■■□□ 18.1
SUB1P53999 MRPS16-205ENST00000479005 2580 ntTSL 211.9□□□□□ -0.51e-13■■■□□ 18.1
SUB1P53999 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.691e-13■■■□□ 18.1
SUB1P53999 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.33□□□□□ -0.288e-7■■■□□ 18.1
SUB1P53999 AGRN-203ENST00000461111 3385 ntTSL 1 (best)9.96□□□□□ -0.828e-7■■■□□ 18.1
SUB1P53999 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.457e-7■■■□□ 18.1
SUB1P53999 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.087e-7■■■□□ 18.1
SUB1P53999 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.371e-9■■■□□ 18.1
SUB1P53999 TRIM28-209ENST00000597423 733 ntTSL 312.15□□□□□ -0.466e-7■■■□□ 18.1
SUB1P53999 TRIM28-210ENST00000597618 609 ntTSL 27.14□□□□□ -1.276e-7■■■□□ 18.1
SUB1P53999 RHOA-205ENST00000445425 633 ntTSL 311.26□□□□□ -0.611e-6■■■□□ 18.1
SUB1P53999 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.457e-7■■■□□ 18.1
SUB1P53999 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.247e-10■■■□□ 18.1
SUB1P53999 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.99□□□□□ -0.337e-10■■■□□ 18.1
SUB1P53999 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.417e-10■■■□□ 18.1
SUB1P53999 RHOT2-212ENST00000564659 854 ntTSL 212.06□□□□□ -0.482e-7■■■□□ 18.1
SUB1P53999 PSMA7-204ENST00000442551 685 ntTSL 311.72□□□□□ -0.537e-10■■■□□ 18.1
SUB1P53999 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.51□□□□□ -0.577e-10■■■□□ 18.1
SUB1P53999 DMAC2-207ENST00000589503 2317 ntTSL 210.86□□□□□ -0.677e-10■■■□□ 18.1
SUB1P53999 OGFOD1-208ENST00000568172 537 ntTSL 410.58□□□□□ -0.727e-10■■■□□ 18.1
SUB1P53999 OGFOD1-204ENST00000563733 734 ntTSL 210.03□□□□□ -0.87e-10■■■□□ 18.1
SUB1P53999 CCPG1-201ENST00000310958 6822 ntTSL 1 (best) BASIC9.8□□□□□ -0.847e-10■■■□□ 18.1
SUB1P53999 CCPG1-207ENST00000564663 663 ntTSL 38.91□□□□□ -0.987e-10■■■□□ 18.1
SUB1P53999 OGFOD1-206ENST00000565682 567 ntTSL 48.89□□□□□ -0.997e-10■■■□□ 18.1
SUB1P53999 OGFOD1-210ENST00000569645 642 ntTSL 28.73□□□□□ -1.017e-10■■■□□ 18.1
SUB1P53999 MACF1-225ENST00000497807 2689 ntTSL 1 (best)8.5□□□□□ -1.057e-10■■■□□ 18.1
SUB1P53999 RHAG-201ENST00000229810 1283 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.067e-10■■■□□ 18.1
SUB1P53999 RHOT2-220ENST00000569197 530 ntTSL 58.45□□□□□ -1.062e-7■■■□□ 18.1
SUB1P53999 OGFOD1-203ENST00000562150 586 ntTSL 48.26□□□□□ -1.097e-10■■■□□ 18.1
SUB1P53999 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC6.87□□□□□ -1.317e-10■■■□□ 18.1
SUB1P53999 RHAG-203ENST00000618248 1203 ntTSL 5 BASIC6.68□□□□□ -1.347e-10■■■□□ 18.1
SUB1P53999 OGFOD1-202ENST00000561646 584 ntTSL 26.23□□□□□ -1.417e-10■■■□□ 18.1
SUB1P53999 PPT1-201ENST00000372775 563 ntTSL 34.97□□□□□ -1.617e-10■■■□□ 18.1
SUB1P53999 SEC63-204ENST00000459782 2025 ntTSL 1 (best)4.59□□□□□ -1.677e-10■■■□□ 18.1
SUB1P53999 CCPG1-208ENST00000568372 3388 ntTSL 1 (best)4.54□□□□□ -1.687e-10■■■□□ 18.1
SUB1P53999 CCPG1-211ENST00000568808 2866 ntTSL 1 (best)4.31□□□□□ -1.727e-10■■■□□ 18.1
SUB1P53999 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.18□□□□□ -1.747e-10■■■□□ 18.1
SUB1P53999 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.99□□□□□ -1.777e-7■■■□□ 18.1
SUB1P53999 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.26□□□□□ -1.897e-10■■■□□ 18.1
SUB1P53999 OGFOD1-211ENST00000569802 474 ntTSL 43.03□□□□□ -1.927e-10■■■□□ 18.1
SUB1P53999 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.147e-10■■■□□ 18.1
SUB1P53999 CCPG1-210ENST00000568592 702 ntTSL 31.52□□□□□ -2.177e-10■■■□□ 18.1
SUB1P53999 CCPG1-209ENST00000568543 721 ntTSL 31.52□□□□□ -2.177e-10■■■□□ 18.1
SUB1P53999 AKT1-207ENST00000554192 922 ntTSL 211.73□□□□□ -0.538e-9■■■□□ 18.1
SUB1P53999 RPL10-217ENST00000492572 1656 ntTSL 513.62□□□□□ -0.233e-13■■■□□ 18.1
SUB1P53999 RPL10-203ENST00000406022 748 ntTSL 3 BASIC10.46□□□□□ -0.733e-13■■■□□ 18.1
SUB1P53999 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC10.19□□□□□ -0.783e-13■■■□□ 18.1
SUB1P53999 RPL10-210ENST00000458500 585 ntTSL 1 (best)9.93□□□□□ -0.823e-13■■■□□ 18.1
SUB1P53999 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.833e-13■■■□□ 18.1
SUB1P53999 RPL10-204ENST00000424325 2318 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.853e-13■■■□□ 18.1
SUB1P53999 RPL10-207ENST00000436473 657 ntTSL 29.11□□□□□ -0.953e-13■■■□□ 18.1
SUB1P53999 RPL10-215ENST00000489200 1519 ntTSL 29.1□□□□□ -0.953e-13■■■□□ 18.1
SUB1P53999 RPL10-213ENST00000482732 1731 ntTSL 1 (best)9.05□□□□□ -0.963e-13■■■□□ 18.1
SUB1P53999 RPL10-201ENST00000344746 2278 ntAPPRIS P1 TSL 1 (best)8.94□□□□□ -0.983e-13■■■□□ 18.1
SUB1P53999 RPL10-214ENST00000485196 839 ntTSL 28.9□□□□□ -0.983e-13■■■□□ 18.1
Retrieved 100 of 11,644 protein–RNA pairs in 126.3 ms