Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.72■□□□□ 0.59
SMSP52788 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMSP52788 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SMSP52788 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMSP52788 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMSP52788 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMSP52788 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.72■□□□□ 0.59
SMSP52788 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.72■□□□□ 0.59
SMSP52788 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMSP52788 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.72■□□□□ 0.59
SMSP52788 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.72■□□□□ 0.59
SMSP52788 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMSP52788 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMSP52788 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMSP52788 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SMSP52788 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SMSP52788 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMSP52788 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.71■□□□□ 0.59
SMSP52788 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMSP52788 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.71■□□□□ 0.59
SMSP52788 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.71■□□□□ 0.59
SMSP52788 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.71■□□□□ 0.59
SMSP52788 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.71■□□□□ 0.59
SMSP52788 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.71■□□□□ 0.59
SMSP52788 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.71■□□□□ 0.59
SMSP52788 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.71■□□□□ 0.59
SMSP52788 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.71■□□□□ 0.59
SMSP52788 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMSP52788 AC083880.1-201ENST00000608266 535 ntBASIC18.71■□□□□ 0.59
SMSP52788 MYC-209ENST00000641252 345 ntBASIC18.71■□□□□ 0.59
SMSP52788 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMSP52788 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMSP52788 KRT16P2-201ENST00000414673 1423 ntBASIC18.71■□□□□ 0.59
SMSP52788 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMSP52788 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMSP52788 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMSP52788 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMSP52788 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMSP52788 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
SMSP52788 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMSP52788 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMSP52788 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.7■□□□□ 0.58
SMSP52788 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMSP52788 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.7■□□□□ 0.58
SMSP52788 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMSP52788 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMSP52788 GCSHP5-201ENST00000443090 522 ntBASIC18.7■□□□□ 0.58
SMSP52788 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
SMSP52788 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMSP52788 AC091874.3-201ENST00000512672 1195 ntBASIC18.7■□□□□ 0.58
SMSP52788 AC006058.3-201ENST00000606217 1069 ntBASIC18.7■□□□□ 0.58
SMSP52788 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.7■□□□□ 0.58
SMSP52788 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.7■□□□□ 0.58
SMSP52788 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMSP52788 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMSP52788 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SMSP52788 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.7■□□□□ 0.58
SMSP52788 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.7■□□□□ 0.58
SMSP52788 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMSP52788 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMSP52788 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMSP52788 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SMSP52788 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.69■□□□□ 0.58
SMSP52788 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMSP52788 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SMSP52788 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.69■□□□□ 0.58
SMSP52788 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMSP52788 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMSP52788 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMSP52788 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SMSP52788 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMSP52788 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.69■□□□□ 0.58
SMSP52788 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.69■□□□□ 0.58
SMSP52788 AL158047.1-201ENST00000445918 881 ntBASIC18.69■□□□□ 0.58
SMSP52788 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.69■□□□□ 0.58
SMSP52788 AC142381.4-202ENST00000563973 229 ntBASIC18.69■□□□□ 0.58
SMSP52788 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.69■□□□□ 0.58
SMSP52788 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMSP52788 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.69■□□□□ 0.58
SMSP52788 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.69■□□□□ 0.58
SMSP52788 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMSP52788 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMSP52788 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMSP52788 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMSP52788 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMSP52788 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SMSP52788 AC010980.2-201ENST00000587099 1412 ntBASIC18.68■□□□□ 0.58
SMSP52788 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMSP52788 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMSP52788 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMSP52788 AC112907.3-201ENST00000577781 2400 ntBASIC18.68■□□□□ 0.58
SMSP52788 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.68■□□□□ 0.58
SMSP52788 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMSP52788 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMSP52788 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMSP52788 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMSP52788 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
SMSP52788 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.68■□□□□ 0.58
SMSP52788 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.68■□□□□ 0.58
SMSP52788 AC099778.1-201ENST00000568593 1911 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms