Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB28P51157 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.36■□□□□ 0.69
RAB28P51157 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RAB28P51157 FAM201B-201ENST00000458407 597 ntBASIC19.36■□□□□ 0.69
RAB28P51157 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB28P51157 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB28P51157 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB28P51157 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.36■□□□□ 0.69
RAB28P51157 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB28P51157 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB28P51157 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB28P51157 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB28P51157 KRT16P6-202ENST00000425692 1426 ntBASIC19.35■□□□□ 0.69
RAB28P51157 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB28P51157 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RAB28P51157 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RAB28P51157 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB28P51157 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RAB28P51157 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB28P51157 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB28P51157 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB28P51157 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB28P51157 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB28P51157 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB28P51157 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB28P51157 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB28P51157 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB28P51157 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB28P51157 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB28P51157 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB28P51157 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RAB28P51157 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RAB28P51157 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB28P51157 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB28P51157 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB28P51157 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB28P51157 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB28P51157 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB28P51157 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB28P51157 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB28P51157 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB28P51157 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB28P51157 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.34■□□□□ 0.69
RAB28P51157 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.34■□□□□ 0.69
RAB28P51157 AC120498.8-201ENST00000614275 531 ntBASIC19.34■□□□□ 0.69
RAB28P51157 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB28P51157 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB28P51157 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB28P51157 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB28P51157 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RAB28P51157 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB28P51157 LINC01521-201ENST00000504184 1943 ntBASIC19.33■□□□□ 0.69
RAB28P51157 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB28P51157 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RAB28P51157 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RAB28P51157 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB28P51157 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB28P51157 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB28P51157 POM121L13P-201ENST00000422362 380 ntBASIC19.33■□□□□ 0.68
RAB28P51157 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.33■□□□□ 0.68
RAB28P51157 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB28P51157 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB28P51157 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.33■□□□□ 0.68
RAB28P51157 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB28P51157 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB28P51157 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB28P51157 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RAB28P51157 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB28P51157 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB28P51157 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB28P51157 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.33■□□□□ 0.68
RAB28P51157 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RAB28P51157 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB28P51157 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB28P51157 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
RAB28P51157 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB28P51157 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.33■□□□□ 0.68
RAB28P51157 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB28P51157 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB28P51157 BX119927.1-201ENST00000636596 1552 ntBASIC19.32■□□□□ 0.68
RAB28P51157 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB28P51157 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB28P51157 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB28P51157 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms