Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPT1AP50416 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.29■■□□□ 1.16
CPT1AP50416 NIFKP9-201ENST00000419265 221 ntBASIC22.29■■□□□ 1.16
CPT1AP50416 TMPOP1-202ENST00000424642 1267 ntBASIC22.29■■□□□ 1.16
CPT1AP50416 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.29■■□□□ 1.16
CPT1AP50416 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.29■■□□□ 1.16
CPT1AP50416 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CPT1AP50416 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CPT1AP50416 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.29■■□□□ 1.16
CPT1AP50416 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.29■■□□□ 1.16
CPT1AP50416 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPT1AP50416 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CPT1AP50416 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPT1AP50416 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
CPT1AP50416 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPT1AP50416 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.28■■□□□ 1.16
CPT1AP50416 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPT1AP50416 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPT1AP50416 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPT1AP50416 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPT1AP50416 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPT1AP50416 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPT1AP50416 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CPT1AP50416 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CPT1AP50416 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.28■■□□□ 1.16
CPT1AP50416 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.28■■□□□ 1.16
CPT1AP50416 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.28■■□□□ 1.16
CPT1AP50416 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CPT1AP50416 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CPT1AP50416 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPT1AP50416 AC079598.2-202ENST00000546624 1451 ntBASIC22.28■■□□□ 1.16
CPT1AP50416 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPT1AP50416 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.28■■□□□ 1.16
CPT1AP50416 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CPT1AP50416 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPT1AP50416 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPT1AP50416 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CPT1AP50416 AL121603.2-201ENST00000557373 2117 ntBASIC22.27■■□□□ 1.16
CPT1AP50416 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPT1AP50416 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPT1AP50416 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.27■■□□□ 1.16
CPT1AP50416 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPT1AP50416 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPT1AP50416 KRT16P1-201ENST00000399124 1418 ntBASIC22.27■■□□□ 1.16
CPT1AP50416 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.27■■□□□ 1.16
CPT1AP50416 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.27■■□□□ 1.16
CPT1AP50416 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.27■■□□□ 1.16
CPT1AP50416 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.27■■□□□ 1.16
CPT1AP50416 AP000525.1-201ENST00000608286 694 ntBASIC22.27■■□□□ 1.16
CPT1AP50416 MIR6786-201ENST00000616843 113 ntBASIC22.27■■□□□ 1.16
CPT1AP50416 CR392000.1-201ENST00000624770 1228 ntBASIC22.27■■□□□ 1.16
CPT1AP50416 AC012676.1-201ENST00000574705 1949 ntBASIC22.27■■□□□ 1.16
CPT1AP50416 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CPT1AP50416 EP400NL-214ENST00000641289 2402 ntBASIC22.27■■□□□ 1.16
CPT1AP50416 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPT1AP50416 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPT1AP50416 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPT1AP50416 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.26■■□□□ 1.15
CPT1AP50416 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.26■■□□□ 1.15
CPT1AP50416 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.26■■□□□ 1.15
CPT1AP50416 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.26■■□□□ 1.15
CPT1AP50416 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.26■■□□□ 1.15
CPT1AP50416 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPT1AP50416 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.26■■□□□ 1.15
CPT1AP50416 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.26■■□□□ 1.15
CPT1AP50416 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPT1AP50416 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.26■■□□□ 1.15
CPT1AP50416 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CPT1AP50416 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPT1AP50416 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.26■■□□□ 1.15
CPT1AP50416 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.25■■□□□ 1.15
CPT1AP50416 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPT1AP50416 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPT1AP50416 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.25■■□□□ 1.15
CPT1AP50416 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CPT1AP50416 FEM1AP4-201ENST00000443167 1987 ntBASIC22.25■■□□□ 1.15
CPT1AP50416 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.25■■□□□ 1.15
CPT1AP50416 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CPT1AP50416 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CPT1AP50416 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPT1AP50416 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPT1AP50416 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPT1AP50416 MIR1238-201ENST00000408483 83 ntBASIC22.25■■□□□ 1.15
CPT1AP50416 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.25■■□□□ 1.15
CPT1AP50416 AC116562.2-201ENST00000507042 360 ntBASIC22.25■■□□□ 1.15
CPT1AP50416 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.25■■□□□ 1.15
CPT1AP50416 RN7SL850P-201ENST00000579959 291 ntBASIC22.25■■□□□ 1.15
CPT1AP50416 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.25■■□□□ 1.15
CPT1AP50416 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.25■■□□□ 1.15
CPT1AP50416 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPT1AP50416 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPT1AP50416 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.25■■□□□ 1.15
CPT1AP50416 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPT1AP50416 PLK5-205ENST00000642079 1969 ntBASIC22.25■■□□□ 1.15
CPT1AP50416 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.25■■□□□ 1.15
CPT1AP50416 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPT1AP50416 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.24■■□□□ 1.15
CPT1AP50416 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.24■■□□□ 1.15
CPT1AP50416 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPT1AP50416 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms