Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.71■□□□□ 0.75
CSNK1EP49674 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CSNK1EP49674 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CSNK1EP49674 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1EP49674 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1EP49674 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1EP49674 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.71■□□□□ 0.75
CSNK1EP49674 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1EP49674 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CSNK1EP49674 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1EP49674 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1EP49674 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1EP49674 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.7■□□□□ 0.74
CSNK1EP49674 PTBP1P-201ENST00000554374 1601 ntBASIC19.7■□□□□ 0.74
CSNK1EP49674 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CSNK1EP49674 MIR1238-201ENST00000408483 83 ntBASIC19.7■□□□□ 0.74
CSNK1EP49674 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.7■□□□□ 0.74
CSNK1EP49674 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.7■□□□□ 0.74
CSNK1EP49674 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.7■□□□□ 0.74
CSNK1EP49674 CR392000.1-201ENST00000624770 1228 ntBASIC19.7■□□□□ 0.74
CSNK1EP49674 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CSNK1EP49674 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1EP49674 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1EP49674 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1EP49674 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CSNK1EP49674 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CSNK1EP49674 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.69■□□□□ 0.74
CSNK1EP49674 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1EP49674 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1EP49674 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1EP49674 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1EP49674 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CSNK1EP49674 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.69■□□□□ 0.74
CSNK1EP49674 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.69■□□□□ 0.74
CSNK1EP49674 AC145285.6-201ENST00000604632 637 ntBASIC19.69■□□□□ 0.74
CSNK1EP49674 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1EP49674 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.69■□□□□ 0.74
CSNK1EP49674 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CSNK1EP49674 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1EP49674 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1EP49674 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1EP49674 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CSNK1EP49674 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1EP49674 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1EP49674 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1EP49674 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1EP49674 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1EP49674 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.68■□□□□ 0.74
CSNK1EP49674 AL031963.3-201ENST00000606441 850 ntBASIC19.68■□□□□ 0.74
CSNK1EP49674 AC005363.2-201ENST00000618631 242 ntBASIC19.68■□□□□ 0.74
CSNK1EP49674 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1EP49674 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.68■□□□□ 0.74
CSNK1EP49674 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1EP49674 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.68■□□□□ 0.74
CSNK1EP49674 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1EP49674 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.68■□□□□ 0.74
CSNK1EP49674 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.67■□□□□ 0.74
CSNK1EP49674 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.67■□□□□ 0.74
CSNK1EP49674 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1EP49674 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1EP49674 AL117328.2-201ENST00000624617 1940 ntBASIC19.67■□□□□ 0.74
CSNK1EP49674 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1EP49674 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1EP49674 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CSNK1EP49674 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1EP49674 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1EP49674 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1EP49674 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1EP49674 KRT18P35-201ENST00000510488 1269 ntBASIC19.67■□□□□ 0.74
CSNK1EP49674 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.67■□□□□ 0.74
CSNK1EP49674 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.67■□□□□ 0.74
CSNK1EP49674 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.67■□□□□ 0.74
CSNK1EP49674 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1EP49674 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.67■□□□□ 0.74
CSNK1EP49674 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1EP49674 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1EP49674 KRT8P20-201ENST00000423953 1409 ntBASIC19.67■□□□□ 0.74
CSNK1EP49674 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.67■□□□□ 0.74
CSNK1EP49674 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1EP49674 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1EP49674 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.66■□□□□ 0.74
CSNK1EP49674 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1EP49674 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1EP49674 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1EP49674 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1EP49674 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.66■□□□□ 0.74
CSNK1EP49674 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1EP49674 ARMC10P1-201ENST00000313754 855 ntBASIC19.66■□□□□ 0.74
CSNK1EP49674 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.66■□□□□ 0.74
CSNK1EP49674 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.66■□□□□ 0.74
CSNK1EP49674 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.66■□□□□ 0.74
CSNK1EP49674 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.66■□□□□ 0.74
CSNK1EP49674 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.66■□□□□ 0.74
CSNK1EP49674 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CSNK1EP49674 AL049597.2-201ENST00000565575 961 ntBASIC19.66■□□□□ 0.74
CSNK1EP49674 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.66■□□□□ 0.74
CSNK1EP49674 AC092865.7-201ENST00000641832 219 ntBASIC19.66■□□□□ 0.74
CSNK1EP49674 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
CSNK1EP49674 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1EP49674 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms