Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PRIM1P49642 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PRIM1P49642 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC26.16■■□□□ 1.78
PRIM1P49642 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PRIM1P49642 TMA16-209ENST00000513272 803 ntTSL 2 BASIC26.16■■□□□ 1.78
PRIM1P49642 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC26.16■■□□□ 1.78
PRIM1P49642 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC26.16■■□□□ 1.78
PRIM1P49642 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PRIM1P49642 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PRIM1P49642 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PRIM1P49642 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.16■■□□□ 1.78
PRIM1P49642 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PRIM1P49642 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.16■■□□□ 1.78
PRIM1P49642 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC26.15■■□□□ 1.78
PRIM1P49642 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
PRIM1P49642 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
PRIM1P49642 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PRIM1P49642 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PRIM1P49642 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
PRIM1P49642 GUSBP5-202ENST00000510805 1989 ntBASIC26.15■■□□□ 1.78
PRIM1P49642 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC26.15■■□□□ 1.78
PRIM1P49642 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
PRIM1P49642 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
PRIM1P49642 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC26.15■■□□□ 1.78
PRIM1P49642 SLC25A3P1-201ENST00000443844 931 ntBASIC26.15■■□□□ 1.78
PRIM1P49642 DUX4L26-201ENST00000489078 1255 ntBASIC26.15■■□□□ 1.78
PRIM1P49642 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC26.15■■□□□ 1.78
PRIM1P49642 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.15■■□□□ 1.78
PRIM1P49642 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PRIM1P49642 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC26.15■■□□□ 1.78
PRIM1P49642 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PRIM1P49642 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PRIM1P49642 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC26.15■■□□□ 1.78
PRIM1P49642 AC027702.1-201ENST00000563810 1770 ntBASIC26.15■■□□□ 1.78
PRIM1P49642 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.15■■□□□ 1.78
PRIM1P49642 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.15■■□□□ 1.78
PRIM1P49642 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PRIM1P49642 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC26.14■■□□□ 1.78
PRIM1P49642 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.14■■□□□ 1.78
PRIM1P49642 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
PRIM1P49642 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PRIM1P49642 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PRIM1P49642 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PRIM1P49642 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PRIM1P49642 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC26.14■■□□□ 1.77
PRIM1P49642 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
PRIM1P49642 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
PRIM1P49642 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.13■■□□□ 1.77
PRIM1P49642 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC26.13■■□□□ 1.77
PRIM1P49642 AC007375.3-201ENST00000600936 2314 ntBASIC26.13■■□□□ 1.77
PRIM1P49642 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC26.13■■□□□ 1.77
PRIM1P49642 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
PRIM1P49642 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC26.13■■□□□ 1.77
PRIM1P49642 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC26.13■■□□□ 1.77
PRIM1P49642 KSR1P1-201ENST00000446298 240 ntBASIC26.13■■□□□ 1.77
PRIM1P49642 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC26.13■■□□□ 1.77
PRIM1P49642 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PRIM1P49642 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC26.13■■□□□ 1.77
PRIM1P49642 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PRIM1P49642 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
PRIM1P49642 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
PRIM1P49642 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PRIM1P49642 STAC-204ENST00000457375 1366 ntTSL 2 BASIC26.12■■□□□ 1.77
PRIM1P49642 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PRIM1P49642 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.12■■□□□ 1.77
PRIM1P49642 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.12■■□□□ 1.77
PRIM1P49642 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.12■■□□□ 1.77
PRIM1P49642 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC26.12■■□□□ 1.77
PRIM1P49642 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC26.12■■□□□ 1.77
PRIM1P49642 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC26.12■■□□□ 1.77
PRIM1P49642 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
PRIM1P49642 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC26.12■■□□□ 1.77
PRIM1P49642 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PRIM1P49642 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PRIM1P49642 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PRIM1P49642 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PRIM1P49642 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PRIM1P49642 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.11■■□□□ 1.77
PRIM1P49642 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PRIM1P49642 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PRIM1P49642 NIFKP9-201ENST00000419265 221 ntBASIC26.11■■□□□ 1.77
PRIM1P49642 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC26.11■■□□□ 1.77
PRIM1P49642 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PRIM1P49642 MIR2861-201ENST00000636310 90 ntBASIC26.11■■□□□ 1.77
PRIM1P49642 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC26.11■■□□□ 1.77
PRIM1P49642 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PRIM1P49642 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC26.11■■□□□ 1.77
PRIM1P49642 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
PRIM1P49642 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC26.1■■□□□ 1.77
PRIM1P49642 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PRIM1P49642 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC26.1■■□□□ 1.77
PRIM1P49642 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
PRIM1P49642 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PRIM1P49642 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
PRIM1P49642 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC26.1■■□□□ 1.77
PRIM1P49642 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC26.1■■□□□ 1.77
PRIM1P49642 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
PRIM1P49642 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC26.1■■□□□ 1.77
PRIM1P49642 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC26.1■■□□□ 1.77
PRIM1P49642 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms