Protein–RNA interactions for Protein: P48016

ATH1, Vacuolar acid trehalase, yeastyeast

Predictions only

Length 1,211 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATH1P48016 UFD4YKL010C 4452 nt2.89□□□□□ -1.95
ATH1P48016 SPO14YKR031C 5052 nt2.88□□□□□ -1.95
ATH1P48016 REV3YPL167C 4515 nt2.88□□□□□ -1.95
ATH1P48016 NUT1YGL151W 3399 nt2.88□□□□□ -1.95
ATH1P48016 YKL225WYKL225W 348 nt2.88□□□□□ -1.95
ATH1P48016 YIL169CYIL169C 2988 nt2.88□□□□□ -1.95
ATH1P48016 AZF1YOR113W 2745 nt2.87□□□□□ -1.95
ATH1P48016 ESL1YIL151C 3357 nt2.85□□□□□ -1.95
ATH1P48016 YHR086W-AYHR086W-A 162 nt2.85□□□□□ -1.95
ATH1P48016 UBR1YGR184C 5853 nt2.85□□□□□ -1.95
ATH1P48016 SYH1YPL105C 2550 nt2.84□□□□□ -1.95
ATH1P48016 SPO24YPR036W-A 204 nt2.84□□□□□ -1.95
ATH1P48016 GEA1YJR031C 4227 nt2.84□□□□□ -1.95
ATH1P48016 SLN1YIL147C 3663 nt2.83□□□□□ -1.96
ATH1P48016 LCL1YPL056C 306 nt2.83□□□□□ -1.96
ATH1P48016 IRE1YHR079C 3348 nt2.83□□□□□ -1.96
ATH1P48016 ILS1YBL076C 3219 nt2.83□□□□□ -1.96
ATH1P48016 TOM1YDR457W 9807 nt2.82□□□□□ -1.96
ATH1P48016 MOT1YPL082C 5604 nt2.82□□□□□ -1.96
ATH1P48016 SRB8YCR081W 4284 nt2.82□□□□□ -1.96
ATH1P48016 RPL26BYGR034W 384 nt2.82□□□□□ -1.96
ATH1P48016 SMC1YFL008W 3678 nt2.82□□□□□ -1.96
ATH1P48016 TOF1YNL273W 3717 nt2.82□□□□□ -1.96
ATH1P48016 tW(CCA)G1tW(CCA)G1 72 nt2.81□□□□□ -1.96
ATH1P48016 tW(CCA)G2tW(CCA)G2 72 nt2.81□□□□□ -1.96
ATH1P48016 tW(CCA)JtW(CCA)J 72 nt2.81□□□□□ -1.96
ATH1P48016 tW(CCA)KtW(CCA)K 72 nt2.81□□□□□ -1.96
ATH1P48016 tW(CCA)MtW(CCA)M 72 nt2.81□□□□□ -1.96
ATH1P48016 tW(CCA)PtW(CCA)P 72 nt2.81□□□□□ -1.96
ATH1P48016 SAP1YER047C 2694 nt2.81□□□□□ -1.96
ATH1P48016 YDR209CYDR209C 414 nt2.8□□□□□ -1.96
ATH1P48016 YBR200W-AYBR200W-A 165 nt2.79□□□□□ -1.96
ATH1P48016 SFB2YNL049C 2631 nt2.78□□□□□ -1.96
ATH1P48016 DYN1YKR054C 12279 nt2.76□□□□□ -1.97
ATH1P48016 NNF2YGR089W 2811 nt2.76□□□□□ -1.97
ATH1P48016 YAR009CYAR009C 3591 nt2.76□□□□□ -1.97
ATH1P48016 PMR1YGL167C 2853 nt2.76□□□□□ -1.97
ATH1P48016 HIR3YJR140C 4947 nt2.76□□□□□ -1.97
ATH1P48016 snR190snR190 190 nt2.75□□□□□ -1.97
ATH1P48016 PET309YLR067C 2898 nt2.75□□□□□ -1.97
ATH1P48016 PIK1YNL267W 3201 nt2.75□□□□□ -1.97
ATH1P48016 GYP5YPL249C 2685 nt2.75□□□□□ -1.97
ATH1P48016 FKS3YMR306W 5358 nt2.74□□□□□ -1.97
ATH1P48016 YEF3YLR249W 3135 nt2.73□□□□□ -1.97
ATH1P48016 FAR11YNL127W 2862 nt2.72□□□□□ -1.97
ATH1P48016 YOR343W-BYOR343W-B 5313 nt2.72□□□□□ -1.97
ATH1P48016 CHS1YNL192W 3396 nt2.71□□□□□ -1.98
ATH1P48016 CHC1YGL206C 4962 nt2.7□□□□□ -1.98
ATH1P48016 MSH6YDR097C 3729 nt2.7□□□□□ -1.98
ATH1P48016 MGA2YIR033W 3342 nt2.69□□□□□ -1.98
ATH1P48016 SEC7YDR170C 6030 nt2.69□□□□□ -1.98
ATH1P48016 YDR098C-BYDR098C-B 5268 nt2.69□□□□□ -1.98
ATH1P48016 YDR210C-DYDR210C-D 5268 nt2.69□□□□□ -1.98
ATH1P48016 YDR316W-BYDR316W-B 5268 nt2.69□□□□□ -1.98
ATH1P48016 YDR365W-BYDR365W-B 5268 nt2.69□□□□□ -1.98
ATH1P48016 YER138CYER138C 5268 nt2.69□□□□□ -1.98
ATH1P48016 YER160CYER160C 5268 nt2.69□□□□□ -1.98
ATH1P48016 YGR038C-BYGR038C-B 5268 nt2.69□□□□□ -1.98
ATH1P48016 YGR161C-DYGR161C-D 5268 nt2.69□□□□□ -1.98
ATH1P48016 YJR027WYJR027W 5268 nt2.69□□□□□ -1.98
ATH1P48016 YLR157C-BYLR157C-B 5268 nt2.69□□□□□ -1.98
ATH1P48016 YML039WYML039W 5268 nt2.69□□□□□ -1.98
ATH1P48016 YML045WYML045W 5268 nt2.69□□□□□ -1.98
ATH1P48016 YMR050CYMR050C 5268 nt2.69□□□□□ -1.98
ATH1P48016 YOL103W-BYOL103W-B 5268 nt2.69□□□□□ -1.98
ATH1P48016 YBR012W-BYBR012W-B 5271 nt2.69□□□□□ -1.98
ATH1P48016 YOR142W-BYOR142W-B 5268 nt2.69□□□□□ -1.98
ATH1P48016 YPL257W-BYPL257W-B 5268 nt2.69□□□□□ -1.98
ATH1P48016 YPR158W-BYPR158W-B 5271 nt2.69□□□□□ -1.98
ATH1P48016 YJL052C-AYJL052C-A 120 nt2.68□□□□□ -1.98
ATH1P48016 tD(GUC)QtD(GUC)Q 75 nt2.67□□□□□ -1.98
ATH1P48016 ESL2YKR096W 3588 nt2.67□□□□□ -1.98
ATH1P48016 BPT1YLL015W 4680 nt2.66□□□□□ -1.98
ATH1P48016 UTP21YLR409C 2820 nt2.66□□□□□ -1.98
ATH1P48016 YLR299C-AYLR299C-A 93 nt2.66□□□□□ -1.98
ATH1P48016 YBL005W-BYBL005W-B 5268 nt2.66□□□□□ -1.98
ATH1P48016 YCS4YLR272C 3531 nt2.66□□□□□ -1.98
ATH1P48016 YLR422WYLR422W 5799 nt2.66□□□□□ -1.98
ATH1P48016 YDL159W-AYDL159W-A 132 nt2.65□□□□□ -1.99
ATH1P48016 GIP3YPL137C 3831 nt2.64□□□□□ -1.99
ATH1P48016 TOP2YNL088W 4287 nt2.64□□□□□ -1.99
ATH1P48016 BCK1YJL095W 4437 nt2.64□□□□□ -1.99
ATH1P48016 NUM1YDR150W 8247 nt2.63□□□□□ -1.99
ATH1P48016 PKH3YDR466W 2697 nt2.63□□□□□ -1.99
ATH1P48016 EMC5YIL027C 426 nt2.63□□□□□ -1.99
ATH1P48016 SAC3YDR159W 3906 nt2.63□□□□□ -1.99
ATH1P48016 ESC1YMR219W 4977 nt2.63□□□□□ -1.99
ATH1P48016 RTT101YJL047C 2529 nt2.61□□□□□ -1.99
ATH1P48016 ANS1YHR126C 480 nt2.61□□□□□ -1.99
ATH1P48016 ECM29YHL030W 5607 nt2.61□□□□□ -1.99
ATH1P48016 CYR1YJL005W 6081 nt2.61□□□□□ -1.99
ATH1P48016 HSL1YKL101W 4557 nt2.61□□□□□ -1.99
ATH1P48016 RAD50YNL250W 3939 nt2.6□□□□□ -1.99
ATH1P48016 NUP170YBL079W 4509 nt2.6□□□□□ -1.99
ATH1P48016 RAV1YJR033C 4074 nt2.6□□□□□ -1.99
ATH1P48016 KRE33YNL132W 3171 nt2.59□□□□□ -1.99
ATH1P48016 KIP1YBL063W 3336 nt2.59□□□□□ -2
ATH1P48016 BRE1YDL074C 2103 nt2.59□□□□□ -2
ATH1P48016 BNR1YIL159W 4128 nt2.58□□□□□ -2
ATH1P48016 SIR4YDR227W 4077 nt2.57□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 60.4 ms