Protein–RNA interactions for Protein: P47080

YJL007C, Uncharacterized protein YJL007C, yeastyeast

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJL007CP47080 MMS4YBR098W 2076 nt2.52□□□□□ -2.01
YJL007CP47080 CHC1YGL206C 4962 nt2.52□□□□□ -2.01
YJL007CP47080 YGL182CYGL182C 324 nt2.51□□□□□ -2.01
YJL007CP47080 YHR086W-AYHR086W-A 162 nt2.51□□□□□ -2.01
YJL007CP47080 LHS1YKL073W 2646 nt2.51□□□□□ -2.01
YJL007CP47080 YER172C-AYER172C-A 381 nt2.5□□□□□ -2.01
YJL007CP47080 YGL123C-AYGL123C-A 231 nt2.5□□□□□ -2.01
YJL007CP47080 TOF1YNL273W 3717 nt2.5□□□□□ -2.01
YJL007CP47080 BFR2YDR299W 1605 nt2.5□□□□□ -2.01
YJL007CP47080 YLL054CYLL054C 2532 nt2.49□□□□□ -2.01
YJL007CP47080 SPF1YEL031W 3648 nt2.49□□□□□ -2.01
YJL007CP47080 IRC8YJL051W 2469 nt2.49□□□□□ -2.01
YJL007CP47080 CMC4YMR194C-B 222 nt2.49□□□□□ -2.01
YJL007CP47080 SBH1YER087C-B 249 nt2.48□□□□□ -2.01
YJL007CP47080 COX5BYIL111W 456 nt2.48□□□□□ -2.01
YJL007CP47080 YEF3YLR249W 3135 nt2.48□□□□□ -2.01
YJL007CP47080 UTP8YGR128C 2142 nt2.47□□□□□ -2.01
YJL007CP47080 snR61snR61 90 nt2.47□□□□□ -2.01
YJL007CP47080 PMP2YEL017C-A 132 nt2.47□□□□□ -2.01
YJL007CP47080 LCL1YPL056C 306 nt2.47□□□□□ -2.01
YJL007CP47080 STF2YGR008C 255 nt2.46□□□□□ -2.02
YJL007CP47080 SKI3YPR189W 4299 nt2.45□□□□□ -2.02
YJL007CP47080 UTP22YGR090W 3714 nt2.45□□□□□ -2.02
YJL007CP47080 PDR8YLR266C 2106 nt2.45□□□□□ -2.02
YJL007CP47080 YOR343W-BYOR343W-B 5313 nt2.44□□□□□ -2.02
YJL007CP47080 SOM1YEL059C-A 225 nt2.43□□□□□ -2.02
YJL007CP47080 RAD50YNL250W 3939 nt2.43□□□□□ -2.02
YJL007CP47080 CLU1YMR012W 3834 nt2.42□□□□□ -2.02
YJL007CP47080 YNL103W-AYNL103W-A 90 nt2.42□□□□□ -2.02
YJL007CP47080 TFC3YAL001C 3483 nt2.42□□□□□ -2.02
YJL007CP47080 RGA1YOR127W 3024 nt2.42□□□□□ -2.02
YJL007CP47080 YAR009CYAR009C 3591 nt2.41□□□□□ -2.02
YJL007CP47080 FLO11YIR019C 4104 nt2.41□□□□□ -2.02
YJL007CP47080 GYP5YPL249C 2685 nt2.41□□□□□ -2.02
YJL007CP47080 MYO4YAL029C 4416 nt2.41□□□□□ -2.02
YJL007CP47080 RAD9YDR217C 3930 nt2.41□□□□□ -2.02
YJL007CP47080 EAF1YDR359C 2949 nt2.41□□□□□ -2.02
YJL007CP47080 YDL247W-AYDL247W-A 75 nt2.4□□□□□ -2.03
YJL007CP47080 STB6YKL072W 2301 nt2.39□□□□□ -2.03
YJL007CP47080 SVL3YPL032C 2478 nt2.39□□□□□ -2.03
YJL007CP47080 YBL039C-AYBL039C-A 84 nt2.39□□□□□ -2.03
YJL007CP47080 COA6YMR244C-A 315 nt2.39□□□□□ -2.03
YJL007CP47080 YNL067W-BYNL067W-B 141 nt2.38□□□□□ -2.03
YJL007CP47080 MDS3YGL197W 4464 nt2.37□□□□□ -2.03
YJL007CP47080 YJL052C-AYJL052C-A 120 nt2.36□□□□□ -2.03
YJL007CP47080 SLX4YLR135W 2247 nt2.36□□□□□ -2.03
YJL007CP47080 SMC1YFL008W 3678 nt2.35□□□□□ -2.03
YJL007CP47080 YML002WYML002W 2214 nt2.34□□□□□ -2.03
YJL007CP47080 YOR161W-AYOR161W-A 81 nt2.34□□□□□ -2.03
YJL007CP47080 RTP1YMR185W 2946 nt2.34□□□□□ -2.04
YJL007CP47080 YLR041WYLR041W 321 nt2.32□□□□□ -2.04
YJL007CP47080 KAP122YGL016W 3246 nt2.32□□□□□ -2.04
YJL007CP47080 TAH1YCR060W 336 nt2.31□□□□□ -2.04
YJL007CP47080 KOG1YHR186C 4674 nt2.3□□□□□ -2.04
YJL007CP47080 BNR1YIL159W 4128 nt2.3□□□□□ -2.04
YJL007CP47080 VPS13YLL040C 9435 nt2.3□□□□□ -2.04
YJL007CP47080 QCR9YGR183C 201 nt2.3□□□□□ -2.04
YJL007CP47080 NOP9YJL010C 2001 nt2.3□□□□□ -2.04
YJL007CP47080 YHR180W-AYHR180W-A 183 nt2.28□□□□□ -2.04
YJL007CP47080 TMA7YLR262C-A 195 nt2.28□□□□□ -2.04
YJL007CP47080 UBP2YOR124C 3819 nt2.28□□□□□ -2.04
YJL007CP47080 BNI1YNL271C 5862 nt2.27□□□□□ -2.05
YJL007CP47080 DNF1YER166W 4716 nt2.27□□□□□ -2.05
YJL007CP47080 SEC3YER008C 4011 nt2.26□□□□□ -2.05
YJL007CP47080 SEC16YPL085W 6588 nt2.25□□□□□ -2.05
YJL007CP47080 IRA2YOL081W 9240 nt2.25□□□□□ -2.05
YJL007CP47080 UBR2YLR024C 5619 nt2.24□□□□□ -2.05
YJL007CP47080 RPL26BYGR034W 384 nt2.24□□□□□ -2.05
YJL007CP47080 UFD4YKL010C 4452 nt2.24□□□□□ -2.05
YJL007CP47080 SET3YKR029C 2256 nt2.24□□□□□ -2.05
YJL007CP47080 IRC20YLR247C 4671 nt2.23□□□□□ -2.05
YJL007CP47080 snR14snR14 160 nt2.23□□□□□ -2.05
YJL007CP47080 SWI4YER111C 3282 nt2.23□□□□□ -2.05
YJL007CP47080 BRE1YDL074C 2103 nt2.23□□□□□ -2.05
YJL007CP47080 CSF1YLR087C 8877 nt2.22□□□□□ -2.05
YJL007CP47080 tM(CAU)Q2tM(CAU)Q2 78 nt2.22□□□□□ -2.05
YJL007CP47080 snR39BsnR39B 96 nt2.22□□□□□ -2.05
YJL007CP47080 SMC4YLR086W 4257 nt2.22□□□□□ -2.05
YJL007CP47080 TRA1YHR099W 11235 nt2.21□□□□□ -2.05
YJL007CP47080 YHR131W-AYHR131W-A 246 nt2.21□□□□□ -2.06
YJL007CP47080 STO1YMR125W 2586 nt2.21□□□□□ -2.06
YJL007CP47080 YLR232WYLR232W 348 nt2.2□□□□□ -2.06
YJL007CP47080 NUP145YGL092W 3954 nt2.19□□□□□ -2.06
YJL007CP47080 WAR1YML076C 2835 nt2.18□□□□□ -2.06
YJL007CP47080 FAB1YFR019W 6837 nt2.18□□□□□ -2.06
YJL007CP47080 PEP1YBL017C 4740 nt2.18□□□□□ -2.06
YJL007CP47080 snR190snR190 190 nt2.18□□□□□ -2.06
YJL007CP47080 FYV10YIL097W 1551 nt2.18□□□□□ -2.06
YJL007CP47080 YGL041C-BYGL041C-B 183 nt2.17□□□□□ -2.06
YJL007CP47080 CHS1YNL192W 3396 nt2.17□□□□□ -2.06
YJL007CP47080 SEC21YNL287W 2808 nt2.17□□□□□ -2.06
YJL007CP47080 DGR1YNL130C-A 147 nt2.15□□□□□ -2.07
YJL007CP47080 APL3YBL037W 3078 nt2.14□□□□□ -2.07
YJL007CP47080 ASE1YOR058C 2658 nt2.13□□□□□ -2.07
YJL007CP47080 PKH3YDR466W 2697 nt2.12□□□□□ -2.07
YJL007CP47080 YBR200W-AYBR200W-A 165 nt2.12□□□□□ -2.07
YJL007CP47080 NUP192YJL039C 5052 nt2.12□□□□□ -2.07
YJL007CP47080 YOL098CYOL098C 3114 nt2.12□□□□□ -2.07
YJL007CP47080 TOR2YKL203C 7425 nt2.11□□□□□ -2.07
YJL007CP47080 SPP41YDR464W 4308 nt2.11□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms