Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP13P45452 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
MMP13P45452 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.81■□□□□ 0.92
MMP13P45452 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP13P45452 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP13P45452 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP13P45452 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP13P45452 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP13P45452 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP13P45452 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP13P45452 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.81■□□□□ 0.92
MMP13P45452 AC100791.3-201ENST00000617619 330 ntBASIC20.81■□□□□ 0.92
MMP13P45452 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP13P45452 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP13P45452 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
MMP13P45452 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP13P45452 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
MMP13P45452 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
MMP13P45452 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP13P45452 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP13P45452 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
MMP13P45452 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP13P45452 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP13P45452 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP13P45452 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP13P45452 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP13P45452 AC093787.1-201ENST00000450396 207 ntBASIC20.8■□□□□ 0.92
MMP13P45452 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.8■□□□□ 0.92
MMP13P45452 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
MMP13P45452 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP13P45452 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
MMP13P45452 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP13P45452 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
MMP13P45452 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP13P45452 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP13P45452 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MMP13P45452 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.8■□□□□ 0.92
MMP13P45452 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MMP13P45452 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP13P45452 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP13P45452 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MMP13P45452 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
MMP13P45452 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
MMP13P45452 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.79■□□□□ 0.92
MMP13P45452 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP13P45452 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
MMP13P45452 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP13P45452 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MMP13P45452 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.79■□□□□ 0.92
MMP13P45452 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP13P45452 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP13P45452 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP13P45452 MCRIP2P1-201ENST00000394346 511 ntBASIC20.79■□□□□ 0.92
MMP13P45452 AL512625.2-201ENST00000417533 625 ntBASIC20.79■□□□□ 0.92
MMP13P45452 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.79■□□□□ 0.92
MMP13P45452 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.79■□□□□ 0.92
MMP13P45452 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.79■□□□□ 0.92
MMP13P45452 AC090192.1-201ENST00000517740 490 ntBASIC20.79■□□□□ 0.92
MMP13P45452 AF201337.1-201ENST00000520239 748 ntBASIC20.79■□□□□ 0.92
MMP13P45452 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
MMP13P45452 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP13P45452 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP13P45452 AC087633.2-202ENST00000565166 1439 ntBASIC20.78■□□□□ 0.92
MMP13P45452 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.78■□□□□ 0.92
MMP13P45452 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MMP13P45452 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP13P45452 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.78■□□□□ 0.92
MMP13P45452 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MMP13P45452 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MMP13P45452 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.78■□□□□ 0.92
MMP13P45452 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MMP13P45452 PGM5P4-201ENST00000421970 445 ntBASIC20.78■□□□□ 0.92
MMP13P45452 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.78■□□□□ 0.92
MMP13P45452 AC105036.2-201ENST00000569468 176 ntBASIC20.78■□□□□ 0.92
MMP13P45452 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP13P45452 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MMP13P45452 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MMP13P45452 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP13P45452 AC010980.2-201ENST00000587099 1412 ntBASIC20.78■□□□□ 0.92
MMP13P45452 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MMP13P45452 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP13P45452 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP13P45452 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MMP13P45452 AC125437.2-201ENST00000625180 2167 ntBASIC20.78■□□□□ 0.92
MMP13P45452 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
MMP13P45452 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.77■□□□□ 0.92
MMP13P45452 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.77■□□□□ 0.92
MMP13P45452 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.77■□□□□ 0.92
MMP13P45452 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP13P45452 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
MMP13P45452 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MMP13P45452 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.77■□□□□ 0.92
MMP13P45452 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.77■□□□□ 0.92
MMP13P45452 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.77■□□□□ 0.92
MMP13P45452 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MMP13P45452 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
MMP13P45452 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.77■□□□□ 0.91
MMP13P45452 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
MMP13P45452 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
MMP13P45452 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms