Protein–RNA interactions for Protein: P40463

VHS2, Protein VHS2, yeastyeast

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VHS2P40463 SGF11YPL047W 300 nt0.86□□□□□ -2.27
VHS2P40463 COG8YML071C 1824 nt0.86□□□□□ -2.27
VHS2P40463 BFR2YDR299W 1605 nt0.86□□□□□ -2.27
VHS2P40463 BEM2YER155C 6504 nt0.85□□□□□ -2.27
VHS2P40463 YGL149WYGL149W 306 nt0.85□□□□□ -2.27
VHS2P40463 RPS27BYHR021C 249 nt0.85□□□□□ -2.27
VHS2P40463 tV(UAC)BtV(UAC)B 74 nt0.85□□□□□ -2.27
VHS2P40463 tV(UAC)DtV(UAC)D 74 nt0.85□□□□□ -2.27
VHS2P40463 INA22YIR024C 651 nt0.85□□□□□ -2.27
VHS2P40463 YNL211CYNL211C 261 nt0.85□□□□□ -2.27
VHS2P40463 DOP1YDR141C 5097 nt0.85□□□□□ -2.27
VHS2P40463 VIK1YPL253C 1944 nt0.84□□□□□ -2.27
VHS2P40463 YFL063WYFL063W 456 nt0.84□□□□□ -2.27
VHS2P40463 CSE2YNR010W 450 nt0.84□□□□□ -2.27
VHS2P40463 YOR218CYOR218C 420 nt0.84□□□□□ -2.27
VHS2P40463 SIP4YJL089W 2490 nt0.84□□□□□ -2.28
VHS2P40463 YJR029WYJR029W 5268 nt0.84□□□□□ -2.28
VHS2P40463 YPR137C-BYPR137C-B 5268 nt0.84□□□□□ -2.28
VHS2P40463 PMP1YCR024C-A 123 nt0.83□□□□□ -2.28
VHS2P40463 YMR031W-AYMR031W-A 327 nt0.83□□□□□ -2.28
VHS2P40463 YMR193C-AYMR193C-A 387 nt0.83□□□□□ -2.28
VHS2P40463 YNL146WYNL146W 303 nt0.83□□□□□ -2.28
VHS2P40463 STE5YDR103W 2754 nt0.83□□□□□ -2.28
VHS2P40463 RKR1YMR247C 4689 nt0.82□□□□□ -2.28
VHS2P40463 RPL39YJL189W 156 nt0.82□□□□□ -2.28
VHS2P40463 YPR117WYPR117W 7470 nt0.81□□□□□ -2.28
VHS2P40463 TTI1YKL033W 3117 nt0.81□□□□□ -2.28
VHS2P40463 RPL26BYGR034W 384 nt0.81□□□□□ -2.28
VHS2P40463 YHR063W-AYHR063W-A 336 nt0.79□□□□□ -2.28
VHS2P40463 YFR012W-AYFR012W-A 87 nt0.77□□□□□ -2.29
VHS2P40463 NPR2YEL062W 1848 nt0.76□□□□□ -2.29
VHS2P40463 YPR010C-AYPR010C-A 219 nt0.76□□□□□ -2.29
VHS2P40463 ASE1YOR058C 2658 nt0.75□□□□□ -2.29
VHS2P40463 snR65snR65 100 nt0.75□□□□□ -2.29
VHS2P40463 YDR354C-AYDR354C-A 144 nt0.75□□□□□ -2.29
VHS2P40463 YNL028WYNL028W 318 nt0.75□□□□□ -2.29
VHS2P40463 YNL277W-AYNL277W-A 189 nt0.75□□□□□ -2.29
VHS2P40463 YAL067W-AYAL067W-A 228 nt0.74□□□□□ -2.29
VHS2P40463 YOR231C-AYOR231C-A 201 nt0.74□□□□□ -2.29
VHS2P40463 SEC1YDR164C 2175 nt0.73□□□□□ -2.29
VHS2P40463 YGR069WYGR069W 336 nt0.73□□□□□ -2.29
VHS2P40463 RAD61YDR014W 1944 nt0.73□□□□□ -2.29
VHS2P40463 CHS6YJL099W 2241 nt0.72□□□□□ -2.29
VHS2P40463 YCR018C-AYCR018C-A 255 nt0.72□□□□□ -2.29
VHS2P40463 SEC8YPR055W 3198 nt0.72□□□□□ -2.29
VHS2P40463 YER181CYER181C 324 nt0.71□□□□□ -2.3
VHS2P40463 YDL185C-AYDL185C-A 228 nt0.7□□□□□ -2.3
VHS2P40463 YJL026C-AYJL026C-A 222 nt0.7□□□□□ -2.3
VHS2P40463 YML099W-AYML099W-A 330 nt0.7□□□□□ -2.3
VHS2P40463 YJL197C-AYJL197C-A 282 nt0.69□□□□□ -2.3
VHS2P40463 YMR307C-AYMR307C-A 195 nt0.69□□□□□ -2.3
VHS2P40463 YOR008C-AYOR008C-A 225 nt0.69□□□□□ -2.3
VHS2P40463 YML002WYML002W 2214 nt0.69□□□□□ -2.3
VHS2P40463 YOR015WYOR015W 360 nt0.68□□□□□ -2.3
VHS2P40463 snR190snR190 190 nt0.68□□□□□ -2.3
VHS2P40463 YPR159C-AYPR159C-A 102 nt0.68□□□□□ -2.3
VHS2P40463 YPR160W-AYPR160W-A 81 nt0.68□□□□□ -2.3
VHS2P40463 YEL020C-BYEL020C-B 198 nt0.67□□□□□ -2.3
VHS2P40463 COX5BYIL111W 456 nt0.67□□□□□ -2.3
VHS2P40463 YLR120W-AYLR120W-A 102 nt0.67□□□□□ -2.3
VHS2P40463 YLR399W-AYLR399W-A 105 nt0.67□□□□□ -2.3
VHS2P40463 PAU24YBR301W 363 nt0.67□□□□□ -2.3
VHS2P40463 FYV10YIL097W 1551 nt0.66□□□□□ -2.3
VHS2P40463 MYO1YHR023W 5787 nt0.65□□□□□ -2.3
VHS2P40463 YGL052WYGL052W 306 nt0.65□□□□□ -2.31
VHS2P40463 YLL019W-AYLL019W-A 93 nt0.65□□□□□ -2.31
VHS2P40463 YMR172C-AYMR172C-A 384 nt0.65□□□□□ -2.31
VHS2P40463 YPR092WYPR092W 306 nt0.65□□□□□ -2.31
VHS2P40463 YCR022CYCR022C 345 nt0.64□□□□□ -2.31
VHS2P40463 YOR072W-BYOR072W-B 162 nt0.64□□□□□ -2.31
VHS2P40463 YPL152W-AYPL152W-A 99 nt0.64□□□□□ -2.31
VHS2P40463 YLR282CYLR282C 342 nt0.63□□□□□ -2.31
VHS2P40463 PRP5YBR237W 2550 nt0.62□□□□□ -2.31
VHS2P40463 COY1YKL179C 2040 nt0.62□□□□□ -2.31
VHS2P40463 snR74snR74 88 nt0.61□□□□□ -2.31
VHS2P40463 YJL127W-AYJL127W-A 117 nt0.61□□□□□ -2.31
VHS2P40463 snR49snR49 165 nt0.61□□□□□ -2.31
VHS2P40463 HAL9YOL089C 3093 nt0.6□□□□□ -2.31
VHS2P40463 UTP10YJL109C 5310 nt0.59□□□□□ -2.31
VHS2P40463 snR55snR55 98 nt0.59□□□□□ -2.31
VHS2P40463 OST4YDL232W 111 nt0.59□□□□□ -2.31
VHS2P40463 YGL041CYGL041C 204 nt0.59□□□□□ -2.31
VHS2P40463 YIL134C-AYIL134C-A 204 nt0.59□□□□□ -2.31
VHS2P40463 PAM16YJL104W 450 nt0.59□□□□□ -2.31
VHS2P40463 LTE1YAL024C 4308 nt0.59□□□□□ -2.32
VHS2P40463 UTP20YBL004W 7482 nt0.59□□□□□ -2.32
VHS2P40463 PRP42YDR235W 1635 nt0.58□□□□□ -2.32
VHS2P40463 YGL123C-AYGL123C-A 231 nt0.58□□□□□ -2.32
VHS2P40463 YGL188C-AYGL188C-A 141 nt0.58□□□□□ -2.32
VHS2P40463 YMR272W-AYMR272W-A 114 nt0.58□□□□□ -2.32
VHS2P40463 YOL155W-AYOL155W-A 135 nt0.58□□□□□ -2.32
VHS2P40463 tF(GAA)QtF(GAA)Q 75 nt0.57□□□□□ -2.32
VHS2P40463 STF2YGR008C 255 nt0.57□□□□□ -2.32
VHS2P40463 BLI1YKL061W 342 nt0.57□□□□□ -2.32
VHS2P40463 YIL142C-AYIL142C-A 333 nt0.56□□□□□ -2.32
VHS2P40463 YKL100W-AYKL100W-A 90 nt0.56□□□□□ -2.32
VHS2P40463 YOR161W-AYOR161W-A 81 nt0.56□□□□□ -2.32
VHS2P40463 snR8snR8 190 nt0.55□□□□□ -2.32
VHS2P40463 ULI1YFR026C 510 nt0.55□□□□□ -2.32
VHS2P40463 tN(GUU)QtN(GUU)Q 71 nt0.55□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms