Protein–RNA interactions for Protein: P40344

ATG3, Autophagy-related protein 3, yeastyeast

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG3P40344 NUP157YER105C 4176 nt2.51□□□□□ -2.01
ATG3P40344 TIM9YEL020W-A 264 nt2.51□□□□□ -2.01
ATG3P40344 PDR11YIL013C 4236 nt2.51□□□□□ -2.01
ATG3P40344 PET309YLR067C 2898 nt2.51□□□□□ -2.01
ATG3P40344 IRE1YHR079C 3348 nt2.5□□□□□ -2.01
ATG3P40344 SCD5YOR329C 2619 nt2.5□□□□□ -2.01
ATG3P40344 COG6YNL041C 2520 nt2.49□□□□□ -2.01
ATG3P40344 YER172C-AYER172C-A 381 nt2.49□□□□□ -2.01
ATG3P40344 YOR161W-AYOR161W-A 81 nt2.49□□□□□ -2.01
ATG3P40344 SPO24YPR036W-A 204 nt2.49□□□□□ -2.01
ATG3P40344 RTT101YJL047C 2529 nt2.49□□□□□ -2.01
ATG3P40344 TFC3YAL001C 3483 nt2.47□□□□□ -2.01
ATG3P40344 SFB2YNL049C 2631 nt2.47□□□□□ -2.01
ATG3P40344 PDR3YBL005W 2931 nt2.46□□□□□ -2.02
ATG3P40344 BNI1YNL271C 5862 nt2.46□□□□□ -2.02
ATG3P40344 ALY2YJL084C 3141 nt2.46□□□□□ -2.02
ATG3P40344 COA6YMR244C-A 315 nt2.46□□□□□ -2.02
ATG3P40344 UTP8YGR128C 2142 nt2.45□□□□□ -2.02
ATG3P40344 TOF1YNL273W 3717 nt2.44□□□□□ -2.02
ATG3P40344 STH1YIL126W 4080 nt2.44□□□□□ -2.02
ATG3P40344 UBR2YLR024C 5619 nt2.43□□□□□ -2.02
ATG3P40344 YLL066W-BYLL066W-B 171 nt2.43□□□□□ -2.02
ATG3P40344 SEC63YOR254C 1992 nt2.43□□□□□ -2.02
ATG3P40344 YOL098CYOL098C 3114 nt2.42□□□□□ -2.02
ATG3P40344 KOG1YHR186C 4674 nt2.42□□□□□ -2.02
ATG3P40344 TAH1YCR060W 336 nt2.42□□□□□ -2.02
ATG3P40344 snR70snR70 164 nt2.42□□□□□ -2.02
ATG3P40344 COX5BYIL111W 456 nt2.42□□□□□ -2.02
ATG3P40344 SEY1YOR165W 2331 nt2.42□□□□□ -2.02
ATG3P40344 TBS1YBR150C 3285 nt2.42□□□□□ -2.02
ATG3P40344 PAN2YGL094C 3348 nt2.41□□□□□ -2.02
ATG3P40344 USO1YDL058W 5373 nt2.41□□□□□ -2.02
ATG3P40344 snR45snR45 172 nt2.41□□□□□ -2.02
ATG3P40344 YPP1YGR198W 2454 nt2.4□□□□□ -2.03
ATG3P40344 RTP1YMR185W 2946 nt2.39□□□□□ -2.03
ATG3P40344 YKL100W-AYKL100W-A 90 nt2.39□□□□□ -2.03
ATG3P40344 GCN2YDR283C 4980 nt2.39□□□□□ -2.03
ATG3P40344 RSM22YKL155C 1887 nt2.39□□□□□ -2.03
ATG3P40344 SIR4YDR227W 4077 nt2.38□□□□□ -2.03
ATG3P40344 UTP21YLR409C 2820 nt2.38□□□□□ -2.03
ATG3P40344 MSH6YDR097C 3729 nt2.38□□□□□ -2.03
ATG3P40344 YHR180W-AYHR180W-A 183 nt2.38□□□□□ -2.03
ATG3P40344 CSF1YLR087C 8877 nt2.38□□□□□ -2.03
ATG3P40344 BPH1YCR032W 6504 nt2.37□□□□□ -2.03
ATG3P40344 snR81snR81 201 nt2.37□□□□□ -2.03
ATG3P40344 YJL052C-AYJL052C-A 120 nt2.37□□□□□ -2.03
ATG3P40344 DGR1YNL130C-A 147 nt2.37□□□□□ -2.03
ATG3P40344 YHR214C-BYHR214C-B 5382 nt2.36□□□□□ -2.03
ATG3P40344 UFD4YKL010C 4452 nt2.36□□□□□ -2.03
ATG3P40344 EMC5YIL027C 426 nt2.34□□□□□ -2.03
ATG3P40344 SEC16YPL085W 6588 nt2.33□□□□□ -2.04
ATG3P40344 YAR009CYAR009C 3591 nt2.33□□□□□ -2.04
ATG3P40344 MGA2YIR033W 3342 nt2.33□□□□□ -2.04
ATG3P40344 KCS1YDR017C 3153 nt2.33□□□□□ -2.04
ATG3P40344 RAD50YNL250W 3939 nt2.33□□□□□ -2.04
ATG3P40344 UTP22YGR090W 3714 nt2.32□□□□□ -2.04
ATG3P40344 YLR041WYLR041W 321 nt2.32□□□□□ -2.04
ATG3P40344 YDR210WYDR210W 228 nt2.31□□□□□ -2.04
ATG3P40344 tM(CAU)Q2tM(CAU)Q2 78 nt2.31□□□□□ -2.04
ATG3P40344 INO80YGL150C 4470 nt2.3□□□□□ -2.04
ATG3P40344 KAP120YPL125W 3099 nt2.3□□□□□ -2.04
ATG3P40344 snR14snR14 160 nt2.3□□□□□ -2.04
ATG3P40344 MMS4YBR098W 2076 nt2.3□□□□□ -2.04
ATG3P40344 YML002WYML002W 2214 nt2.3□□□□□ -2.04
ATG3P40344 YMR045CYMR045C 5268 nt2.29□□□□□ -2.04
ATG3P40344 SPP41YDR464W 4308 nt2.29□□□□□ -2.04
ATG3P40344 RGA1YOR127W 3024 nt2.28□□□□□ -2.04
ATG3P40344 YCS4YLR272C 3531 nt2.28□□□□□ -2.04
ATG3P40344 BRE1YDL074C 2103 nt2.28□□□□□ -2.04
ATG3P40344 HER1YOR227W 3741 nt2.27□□□□□ -2.05
ATG3P40344 SLX4YLR135W 2247 nt2.26□□□□□ -2.05
ATG3P40344 KAP122YGL016W 3246 nt2.25□□□□□ -2.05
ATG3P40344 BIR1YJR089W 2865 nt2.25□□□□□ -2.05
ATG3P40344 ATG9YDL149W 2994 nt2.25□□□□□ -2.05
ATG3P40344 YAL037C-AYAL037C-A 93 nt2.25□□□□□ -2.05
ATG3P40344 SEC21YNL287W 2808 nt2.25□□□□□ -2.05
ATG3P40344 ASE1YOR058C 2658 nt2.24□□□□□ -2.05
ATG3P40344 GYP5YPL249C 2685 nt2.24□□□□□ -2.05
ATG3P40344 PDR8YLR266C 2106 nt2.24□□□□□ -2.05
ATG3P40344 UBP2YOR124C 3819 nt2.24□□□□□ -2.05
ATG3P40344 KIP1YBL063W 3336 nt2.24□□□□□ -2.05
ATG3P40344 FYV10YIL097W 1551 nt2.23□□□□□ -2.05
ATG3P40344 SKI3YPR189W 4299 nt2.23□□□□□ -2.05
ATG3P40344 TOR2YKL203C 7425 nt2.23□□□□□ -2.05
ATG3P40344 NOP9YJL010C 2001 nt2.23□□□□□ -2.05
ATG3P40344 SEC31YDL195W 3822 nt2.22□□□□□ -2.05
ATG3P40344 YLR232WYLR232W 348 nt2.22□□□□□ -2.05
ATG3P40344 YBR072C-AYBR072C-A 162 nt2.22□□□□□ -2.05
ATG3P40344 SMC4YLR086W 4257 nt2.22□□□□□ -2.05
ATG3P40344 TRM732YMR259C 4263 nt2.22□□□□□ -2.05
ATG3P40344 RAD9YDR217C 3930 nt2.22□□□□□ -2.05
ATG3P40344 MYO2YOR326W 4725 nt2.22□□□□□ -2.05
ATG3P40344 YLR422WYLR422W 5799 nt2.21□□□□□ -2.06
ATG3P40344 MYO4YAL029C 4416 nt2.2□□□□□ -2.06
ATG3P40344 SEC1YDR164C 2175 nt2.2□□□□□ -2.06
ATG3P40344 YJL127W-AYJL127W-A 117 nt2.2□□□□□ -2.06
ATG3P40344 YNL266WYNL266W 420 nt2.2□□□□□ -2.06
ATG3P40344 MON2YNL297C 4911 nt2.2□□□□□ -2.06
ATG3P40344 YDL073WYDL073W 2955 nt2.19□□□□□ -2.06
ATG3P40344 FIG2YCR089W 4830 nt2.19□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms