Protein–RNA interactions for Protein: P39980

SIT1, Siderophore iron transporter 1, yeastyeast

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIT1P39980 tW(CCA)KtW(CCA)K 72 nt1.84□□□□□ -2.11
SIT1P39980 tW(CCA)MtW(CCA)M 72 nt1.84□□□□□ -2.11
SIT1P39980 tW(CCA)PtW(CCA)P 72 nt1.84□□□□□ -2.11
SIT1P39980 CTF4YPR135W 2784 nt1.84□□□□□ -2.12
SIT1P39980 GYP5YPL249C 2685 nt1.83□□□□□ -2.12
SIT1P39980 ALY2YJL084C 3141 nt1.83□□□□□ -2.12
SIT1P39980 RTP1YMR185W 2946 nt1.82□□□□□ -2.12
SIT1P39980 TBS1YBR150C 3285 nt1.82□□□□□ -2.12
SIT1P39980 YIL020C-AYIL020C-A 339 nt1.82□□□□□ -2.12
SIT1P39980 TRM3YDL112W 4311 nt1.82□□□□□ -2.12
SIT1P39980 YAR009CYAR009C 3591 nt1.82□□□□□ -2.12
SIT1P39980 SNU13YEL026W 381 nt1.81□□□□□ -2.12
SIT1P39980 YHL015W-AYHL015W-A 84 nt1.81□□□□□ -2.12
SIT1P39980 YAL067W-AYAL067W-A 228 nt1.81□□□□□ -2.12
SIT1P39980 NUP170YBL079W 4509 nt1.81□□□□□ -2.12
SIT1P39980 Q0143Q0143 153 nt1.8□□□□□ -2.12
SIT1P39980 YIL002W-AYIL002W-A 210 nt1.8□□□□□ -2.12
SIT1P39980 PAN2YGL094C 3348 nt1.8□□□□□ -2.12
SIT1P39980 VPS15YBR097W 4365 nt1.8□□□□□ -2.12
SIT1P39980 YOR102WYOR102W 351 nt1.79□□□□□ -2.12
SIT1P39980 RSM22YKL155C 1887 nt1.79□□□□□ -2.12
SIT1P39980 PEP1YBL017C 4740 nt1.79□□□□□ -2.12
SIT1P39980 PRP5YBR237W 2550 nt1.78□□□□□ -2.12
SIT1P39980 PIK1YNL267W 3201 nt1.77□□□□□ -2.13
SIT1P39980 PMD1YER132C 5262 nt1.77□□□□□ -2.13
SIT1P39980 YER053C-AYER053C-A 114 nt1.76□□□□□ -2.13
SIT1P39980 YGL123C-AYGL123C-A 231 nt1.76□□□□□ -2.13
SIT1P39980 STO1YMR125W 2586 nt1.76□□□□□ -2.13
SIT1P39980 snR48snR48 113 nt1.75□□□□□ -2.13
SIT1P39980 KCS1YDR017C 3153 nt1.75□□□□□ -2.13
SIT1P39980 YHR214C-BYHR214C-B 5382 nt1.74□□□□□ -2.13
SIT1P39980 KAP122YGL016W 3246 nt1.74□□□□□ -2.13
SIT1P39980 POL5YEL055C 3069 nt1.74□□□□□ -2.13
SIT1P39980 YPP1YGR198W 2454 nt1.74□□□□□ -2.13
SIT1P39980 YOR019WYOR019W 2193 nt1.74□□□□□ -2.13
SIT1P39980 UTP8YGR128C 2142 nt1.73□□□□□ -2.13
SIT1P39980 SET3YKR029C 2256 nt1.73□□□□□ -2.13
SIT1P39980 YOR161W-AYOR161W-A 81 nt1.72□□□□□ -2.13
SIT1P39980 YOR314W-AYOR314W-A 111 nt1.72□□□□□ -2.13
SIT1P39980 IRC20YLR247C 4671 nt1.71□□□□□ -2.14
SIT1P39980 WAR1YML076C 2835 nt1.71□□□□□ -2.14
SIT1P39980 GEA2YEL022W 4380 nt1.7□□□□□ -2.14
SIT1P39980 UTP22YGR090W 3714 nt1.7□□□□□ -2.14
SIT1P39980 CMC4YMR194C-B 222 nt1.7□□□□□ -2.14
SIT1P39980 YNL205CYNL205C 423 nt1.7□□□□□ -2.14
SIT1P39980 EAF1YDR359C 2949 nt1.7□□□□□ -2.14
SIT1P39980 FKS1YLR342W 5631 nt1.7□□□□□ -2.14
SIT1P39980 BST1YFL025C 3090 nt1.69□□□□□ -2.14
SIT1P39980 YKL100W-AYKL100W-A 90 nt1.69□□□□□ -2.14
SIT1P39980 CHS1YNL192W 3396 nt1.68□□□□□ -2.14
SIT1P39980 PET127YOR017W 2403 nt1.68□□□□□ -2.14
SIT1P39980 SSK2YNR031C 4740 nt1.67□□□□□ -2.14
SIT1P39980 CDC31YOR257W 486 nt1.67□□□□□ -2.14
SIT1P39980 APL3YBL037W 3078 nt1.67□□□□□ -2.14
SIT1P39980 BFR2YDR299W 1605 nt1.66□□□□□ -2.14
SIT1P39980 NUP157YER105C 4176 nt1.66□□□□□ -2.14
SIT1P39980 COX5BYIL111W 456 nt1.66□□□□□ -2.14
SIT1P39980 YLR282CYLR282C 342 nt1.66□□□□□ -2.14
SIT1P39980 NOP9YJL010C 2001 nt1.66□□□□□ -2.14
SIT1P39980 snR85snR85 171 nt1.65□□□□□ -2.15
SIT1P39980 FYV8YGR196C 2454 nt1.65□□□□□ -2.15
SIT1P39980 SWI4YER111C 3282 nt1.64□□□□□ -2.15
SIT1P39980 SXM1YDR395W 2835 nt1.64□□□□□ -2.15
SIT1P39980 YFR012W-AYFR012W-A 87 nt1.64□□□□□ -2.15
SIT1P39980 YGL182CYGL182C 324 nt1.64□□□□□ -2.15
SIT1P39980 tQ(UUG)E2tQ(UUG)E2 72 nt1.64□□□□□ -2.15
SIT1P39980 CFT1YDR301W 4074 nt1.64□□□□□ -2.15
SIT1P39980 AZF1YOR113W 2745 nt1.63□□□□□ -2.15
SIT1P39980 tL(UAA)QtL(UAA)Q 85 nt1.63□□□□□ -2.15
SIT1P39980 YCL001W-BYCL001W-B 255 nt1.63□□□□□ -2.15
SIT1P39980 NUP188YML103C 4968 nt1.63□□□□□ -2.15
SIT1P39980 YML002WYML002W 2214 nt1.63□□□□□ -2.15
SIT1P39980 MYO2YOR326W 4725 nt1.63□□□□□ -2.15
SIT1P39980 YLL020CYLL020C 306 nt1.62□□□□□ -2.15
SIT1P39980 YBR200W-AYBR200W-A 165 nt1.62□□□□□ -2.15
SIT1P39980 YLR422WYLR422W 5799 nt1.62□□□□□ -2.15
SIT1P39980 CHS6YJL099W 2241 nt1.61□□□□□ -2.15
SIT1P39980 YCS4YLR272C 3531 nt1.6□□□□□ -2.15
SIT1P39980 TRM732YMR259C 4263 nt1.6□□□□□ -2.15
SIT1P39980 YBL039C-AYBL039C-A 84 nt1.59□□□□□ -2.15
SIT1P39980 NUP145YGL092W 3954 nt1.59□□□□□ -2.16
SIT1P39980 SEC21YNL287W 2808 nt1.58□□□□□ -2.16
SIT1P39980 RPL26BYGR034W 384 nt1.58□□□□□ -2.16
SIT1P39980 snR190snR190 190 nt1.58□□□□□ -2.16
SIT1P39980 YOR093CYOR093C 4947 nt1.58□□□□□ -2.16
SIT1P39980 EST2YLR318W 2655 nt1.58□□□□□ -2.16
SIT1P39980 TAH1YCR060W 336 nt1.57□□□□□ -2.16
SIT1P39980 FYV10YIL097W 1551 nt1.56□□□□□ -2.16
SIT1P39980 YOR329W-AYOR329W-A 210 nt1.54□□□□□ -2.16
SIT1P39980 STB6YKL072W 2301 nt1.53□□□□□ -2.16
SIT1P39980 REV3YPL167C 4515 nt1.52□□□□□ -2.17
SIT1P39980 SAC3YDR159W 3906 nt1.52□□□□□ -2.17
SIT1P39980 FAB1YFR019W 6837 nt1.51□□□□□ -2.17
SIT1P39980 YLR041WYLR041W 321 nt1.51□□□□□ -2.17
SIT1P39980 DNF3YMR162C 4971 nt1.51□□□□□ -2.17
SIT1P39980 QCR9YGR183C 201 nt1.5□□□□□ -2.17
SIT1P39980 ASE1YOR058C 2658 nt1.5□□□□□ -2.17
SIT1P39980 SPC110YDR356W 2835 nt1.49□□□□□ -2.17
SIT1P39980 YLR232WYLR232W 348 nt1.49□□□□□ -2.17
SIT1P39980 YNL067W-BYNL067W-B 141 nt1.49□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 8.7 ms