Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.55■■□□□ 1.68
COL15A1P39059 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL15A1P39059 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL15A1P39059 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC25.55■■□□□ 1.68
COL15A1P39059 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL15A1P39059 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL15A1P39059 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL15A1P39059 KRT18P35-201ENST00000510488 1269 ntBASIC25.55■■□□□ 1.68
COL15A1P39059 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25.55■■□□□ 1.68
COL15A1P39059 AP000525.1-201ENST00000608286 694 ntBASIC25.55■■□□□ 1.68
COL15A1P39059 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL15A1P39059 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL15A1P39059 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL15A1P39059 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL15A1P39059 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.54■■□□□ 1.68
COL15A1P39059 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.54■■□□□ 1.68
COL15A1P39059 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL15A1P39059 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL15A1P39059 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.54■■□□□ 1.68
COL15A1P39059 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC25.54■■□□□ 1.68
COL15A1P39059 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC25.54■■□□□ 1.68
COL15A1P39059 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.54■■□□□ 1.68
COL15A1P39059 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.54■■□□□ 1.68
COL15A1P39059 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.53■■□□□ 1.68
COL15A1P39059 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.53■■□□□ 1.68
COL15A1P39059 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL15A1P39059 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25.53■■□□□ 1.68
COL15A1P39059 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL15A1P39059 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL15A1P39059 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL15A1P39059 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL15A1P39059 P4HB-223ENST00000576390 439 ntTSL 4 BASIC25.53■■□□□ 1.68
COL15A1P39059 AC004264.1-201ENST00000608354 794 ntBASIC25.53■■□□□ 1.68
COL15A1P39059 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.53■■□□□ 1.68
COL15A1P39059 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.53■■□□□ 1.68
COL15A1P39059 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL15A1P39059 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL15A1P39059 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL15A1P39059 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL15A1P39059 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL15A1P39059 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL15A1P39059 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
COL15A1P39059 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COL15A1P39059 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC25.52■■□□□ 1.68
COL15A1P39059 UNC93B2-201ENST00000285383 730 ntBASIC25.52■■□□□ 1.68
COL15A1P39059 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.52■■□□□ 1.68
COL15A1P39059 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COL15A1P39059 AC092865.7-201ENST00000641832 219 ntBASIC25.52■■□□□ 1.68
COL15A1P39059 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.52■■□□□ 1.68
COL15A1P39059 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL15A1P39059 AC121338.2-201ENST00000622535 1744 ntBASIC25.52■■□□□ 1.68
COL15A1P39059 PTBP1P-201ENST00000554374 1601 ntBASIC25.52■■□□□ 1.68
COL15A1P39059 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC25.51■■□□□ 1.67
COL15A1P39059 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
COL15A1P39059 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL15A1P39059 AP002982.1-201ENST00000492365 877 ntBASIC25.51■■□□□ 1.67
COL15A1P39059 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC25.51■■□□□ 1.67
COL15A1P39059 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
COL15A1P39059 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.51■■□□□ 1.67
COL15A1P39059 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL15A1P39059 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
COL15A1P39059 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL15A1P39059 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL15A1P39059 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL15A1P39059 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL15A1P39059 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.5■■□□□ 1.67
COL15A1P39059 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL15A1P39059 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL15A1P39059 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.5■■□□□ 1.67
COL15A1P39059 AL031963.3-201ENST00000606441 850 ntBASIC25.5■■□□□ 1.67
COL15A1P39059 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.5■■□□□ 1.67
COL15A1P39059 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL15A1P39059 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL15A1P39059 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL15A1P39059 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
COL15A1P39059 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
COL15A1P39059 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC25.49■■□□□ 1.67
COL15A1P39059 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL15A1P39059 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC25.49■■□□□ 1.67
COL15A1P39059 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC25.49■■□□□ 1.67
COL15A1P39059 GLDC-219ENST00000640208 420 ntTSL 2 BASIC25.49■■□□□ 1.67
COL15A1P39059 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
COL15A1P39059 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
COL15A1P39059 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL15A1P39059 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
COL15A1P39059 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL15A1P39059 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
COL15A1P39059 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL15A1P39059 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
COL15A1P39059 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.49■■□□□ 1.67
COL15A1P39059 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.48■■□□□ 1.67
COL15A1P39059 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL15A1P39059 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
COL15A1P39059 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL15A1P39059 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL15A1P39059 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC25.48■■□□□ 1.67
COL15A1P39059 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL15A1P39059 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
COL15A1P39059 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC25.48■■□□□ 1.67
COL15A1P39059 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms