Protein–RNA interactions for Protein: P38889

SKN7, Transcription factor SKN7, yeastyeast

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKN7P38889 SMC6YLR383W 3345 nt2.34□□□□□ -2.04
SKN7P38889 tW(CCA)G1tW(CCA)G1 72 nt2.33□□□□□ -2.04
SKN7P38889 tW(CCA)G2tW(CCA)G2 72 nt2.33□□□□□ -2.04
SKN7P38889 tW(CCA)JtW(CCA)J 72 nt2.33□□□□□ -2.04
SKN7P38889 tW(CCA)KtW(CCA)K 72 nt2.33□□□□□ -2.04
SKN7P38889 tW(CCA)MtW(CCA)M 72 nt2.33□□□□□ -2.04
SKN7P38889 tW(CCA)PtW(CCA)P 72 nt2.33□□□□□ -2.04
SKN7P38889 HSL1YKL101W 4557 nt2.33□□□□□ -2.04
SKN7P38889 YKL100W-AYKL100W-A 90 nt2.32□□□□□ -2.04
SKN7P38889 ATG11YPR049C 3537 nt2.31□□□□□ -2.04
SKN7P38889 YOR343W-BYOR343W-B 5313 nt2.31□□□□□ -2.04
SKN7P38889 MMS4YBR098W 2076 nt2.31□□□□□ -2.04
SKN7P38889 IRA2YOL081W 9240 nt2.31□□□□□ -2.04
SKN7P38889 PDR1YGL013C 3207 nt2.3□□□□□ -2.04
SKN7P38889 TRS130YMR218C 3309 nt2.3□□□□□ -2.04
SKN7P38889 TIM9YEL020W-A 264 nt2.3□□□□□ -2.04
SKN7P38889 YKL225WYKL225W 348 nt2.3□□□□□ -2.04
SKN7P38889 FRK1YPL141C 2598 nt2.3□□□□□ -2.04
SKN7P38889 SEC21YNL287W 2808 nt2.29□□□□□ -2.04
SKN7P38889 INP51YIL002C 2841 nt2.29□□□□□ -2.04
SKN7P38889 SLI15YBR156C 2097 nt2.29□□□□□ -2.04
SKN7P38889 MRD1YPR112C 2664 nt2.28□□□□□ -2.04
SKN7P38889 ARP8YOR141C 2646 nt2.28□□□□□ -2.04
SKN7P38889 YOR055WYOR055W 435 nt2.27□□□□□ -2.05
SKN7P38889 YEF3YLR249W 3135 nt2.27□□□□□ -2.05
SKN7P38889 CDC60YPL160W 3273 nt2.26□□□□□ -2.05
SKN7P38889 RTP1YMR185W 2946 nt2.26□□□□□ -2.05
SKN7P38889 RSM22YKL155C 1887 nt2.26□□□□□ -2.05
SKN7P38889 TBS1YBR150C 3285 nt2.25□□□□□ -2.05
SKN7P38889 PSD2YGR170W 3417 nt2.25□□□□□ -2.05
SKN7P38889 CHC1YGL206C 4962 nt2.25□□□□□ -2.05
SKN7P38889 ADR1YDR216W 3972 nt2.25□□□□□ -2.05
SKN7P38889 NUP100YKL068W 2880 nt2.24□□□□□ -2.05
SKN7P38889 NUP170YBL079W 4509 nt2.24□□□□□ -2.05
SKN7P38889 YER172C-AYER172C-A 381 nt2.24□□□□□ -2.05
SKN7P38889 BPH1YCR032W 6504 nt2.24□□□□□ -2.05
SKN7P38889 BUD2YKL092C 3315 nt2.24□□□□□ -2.05
SKN7P38889 YDL159W-AYDL159W-A 132 nt2.23□□□□□ -2.05
SKN7P38889 MSH5YDL154W 2706 nt2.23□□□□□ -2.05
SKN7P38889 SAP185YJL098W 3177 nt2.22□□□□□ -2.05
SKN7P38889 PDR11YIL013C 4236 nt2.22□□□□□ -2.05
SKN7P38889 CBF2YGR140W 2871 nt2.22□□□□□ -2.05
SKN7P38889 YLR041WYLR041W 321 nt2.22□□□□□ -2.05
SKN7P38889 COA6YMR244C-A 315 nt2.22□□□□□ -2.05
SKN7P38889 UFD4YKL010C 4452 nt2.21□□□□□ -2.06
SKN7P38889 SEC10YLR166C 2616 nt2.21□□□□□ -2.06
SKN7P38889 AGC1YPR021C 2709 nt2.21□□□□□ -2.06
SKN7P38889 BEM3YPL115C 3387 nt2.21□□□□□ -2.06
SKN7P38889 SPF1YEL031W 3648 nt2.21□□□□□ -2.06
SKN7P38889 PIK1YNL267W 3201 nt2.18□□□□□ -2.06
SKN7P38889 SLN1YIL147C 3663 nt2.18□□□□□ -2.06
SKN7P38889 TUS1YLR425W 3924 nt2.18□□□□□ -2.06
SKN7P38889 REV3YPL167C 4515 nt2.18□□□□□ -2.06
SKN7P38889 SEY1YOR165W 2331 nt2.17□□□□□ -2.06
SKN7P38889 CSF1YLR087C 8877 nt2.17□□□□□ -2.06
SKN7P38889 MSB1YOR188W 3414 nt2.16□□□□□ -2.06
SKN7P38889 YBR200W-AYBR200W-A 165 nt2.16□□□□□ -2.06
SKN7P38889 YOL098CYOL098C 3114 nt2.16□□□□□ -2.06
SKN7P38889 YPR097WYPR097W 3222 nt2.15□□□□□ -2.06
SKN7P38889 SMC1YFL008W 3678 nt2.15□□□□□ -2.07
SKN7P38889 POL5YEL055C 3069 nt2.14□□□□□ -2.07
SKN7P38889 SCP160YJL080C 3669 nt2.14□□□□□ -2.07
SKN7P38889 VPS13YLL040C 9435 nt2.13□□□□□ -2.07
SKN7P38889 SCD5YOR329C 2619 nt2.13□□□□□ -2.07
SKN7P38889 STH1YIL126W 4080 nt2.13□□□□□ -2.07
SKN7P38889 UBR1YGR184C 5853 nt2.12□□□□□ -2.07
SKN7P38889 AZF1YOR113W 2745 nt2.12□□□□□ -2.07
SKN7P38889 RPL26BYGR034W 384 nt2.12□□□□□ -2.07
SKN7P38889 UBP3YER151C 2739 nt2.12□□□□□ -2.07
SKN7P38889 SEC16YPL085W 6588 nt2.11□□□□□ -2.07
SKN7P38889 IRE1YHR079C 3348 nt2.1□□□□□ -2.07
SKN7P38889 KOG1YHR186C 4674 nt2.1□□□□□ -2.07
SKN7P38889 GIP3YPL137C 3831 nt2.09□□□□□ -2.07
SKN7P38889 CTR9YOL145C 3234 nt2.09□□□□□ -2.07
SKN7P38889 BNI1YNL271C 5862 nt2.09□□□□□ -2.07
SKN7P38889 SKI7YOR076C 2244 nt2.09□□□□□ -2.08
SKN7P38889 RPM2YML091C 3609 nt2.09□□□□□ -2.08
SKN7P38889 SIR4YDR227W 4077 nt2.08□□□□□ -2.08
SKN7P38889 YJR039WYJR039W 3366 nt2.08□□□□□ -2.08
SKN7P38889 TRL1YJL087C 2484 nt2.08□□□□□ -2.08
SKN7P38889 TOF1YNL273W 3717 nt2.08□□□□□ -2.08
SKN7P38889 INO80YGL150C 4470 nt2.08□□□□□ -2.08
SKN7P38889 MGA2YIR033W 3342 nt2.07□□□□□ -2.08
SKN7P38889 YGR122C-AYGR122C-A 129 nt2.07□□□□□ -2.08
SKN7P38889 YLR299C-AYLR299C-A 93 nt2.07□□□□□ -2.08
SKN7P38889 SPO24YPR036W-A 204 nt2.06□□□□□ -2.08
SKN7P38889 RGA1YOR127W 3024 nt2.06□□□□□ -2.08
SKN7P38889 PET309YLR067C 2898 nt2.05□□□□□ -2.08
SKN7P38889 ALY2YJL084C 3141 nt2.05□□□□□ -2.08
SKN7P38889 WAR1YML076C 2835 nt2.04□□□□□ -2.08
SKN7P38889 VPS8YAL002W 3825 nt2.04□□□□□ -2.08
SKN7P38889 BRE1YDL074C 2103 nt2.04□□□□□ -2.08
SKN7P38889 tD(GUC)QtD(GUC)Q 75 nt2.04□□□□□ -2.08
SKN7P38889 MET18YIL128W 3099 nt2.04□□□□□ -2.08
SKN7P38889 TFC3YAL001C 3483 nt2.04□□□□□ -2.08
SKN7P38889 GYP5YPL249C 2685 nt2.04□□□□□ -2.08
SKN7P38889 NNF2YGR089W 2811 nt2.03□□□□□ -2.08
SKN7P38889 RPL41AYDL184C 78 nt2.03□□□□□ -2.08
SKN7P38889 RAV1YJR033C 4074 nt2.02□□□□□ -2.09
SKN7P38889 snR190snR190 190 nt2.02□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 24.1 ms