Protein–RNA interactions for Protein: P38329

VHC1, Vacuolar cation-chloride cotransporter 1, yeastyeast

Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VHC1P38329 YPR117WYPR117W 7470 nt1.03□□□□□ -2.24
VHC1P38329 OLI1Q0130 231 nt1.03□□□□□ -2.24
VHC1P38329 ECM12YHR021W-A 456 nt1.03□□□□□ -2.24
VHC1P38329 YOR218CYOR218C 420 nt1.03□□□□□ -2.24
VHC1P38329 SCC2YDR180W 4482 nt1.03□□□□□ -2.25
VHC1P38329 YJR029WYJR029W 5268 nt1.01□□□□□ -2.25
VHC1P38329 YPR137C-BYPR137C-B 5268 nt1.01□□□□□ -2.25
VHC1P38329 snR65snR65 100 nt1.01□□□□□ -2.25
VHC1P38329 YNL028WYNL028W 318 nt1.01□□□□□ -2.25
VHC1P38329 MCM10YIL150C 1716 nt1.01□□□□□ -2.25
VHC1P38329 RAD61YDR014W 1944 nt1□□□□□ -2.25
VHC1P38329 IES4YOR189W 351 nt1□□□□□ -2.25
VHC1P38329 GEA2YEL022W 4380 nt0.99□□□□□ -2.25
VHC1P38329 SMC1YFL008W 3678 nt0.99□□□□□ -2.25
VHC1P38329 YDL196WYDL196W 330 nt0.99□□□□□ -2.25
VHC1P38329 ISD11YER048W-A 285 nt0.99□□□□□ -2.25
VHC1P38329 YNL277W-AYNL277W-A 189 nt0.99□□□□□ -2.25
VHC1P38329 SGF11YPL047W 300 nt0.99□□□□□ -2.25
VHC1P38329 YPR010C-AYPR010C-A 219 nt0.99□□□□□ -2.25
VHC1P38329 NOP9YJL010C 2001 nt0.98□□□□□ -2.25
VHC1P38329 CMC4YMR194C-B 222 nt0.98□□□□□ -2.25
VHC1P38329 YOR015WYOR015W 360 nt0.98□□□□□ -2.25
VHC1P38329 PAM16YJL104W 450 nt0.97□□□□□ -2.25
VHC1P38329 YLR120W-AYLR120W-A 102 nt0.97□□□□□ -2.25
VHC1P38329 YNL211CYNL211C 261 nt0.97□□□□□ -2.25
VHC1P38329 UBP3YER151C 2739 nt0.97□□□□□ -2.25
VHC1P38329 QCR9YGR183C 201 nt0.96□□□□□ -2.26
VHC1P38329 YPL044CYPL044C 549 nt0.96□□□□□ -2.26
VHC1P38329 PAA1YDR071C 576 nt0.95□□□□□ -2.26
VHC1P38329 tF(GAA)BtF(GAA)B 73 nt0.95□□□□□ -2.26
VHC1P38329 tF(GAA)FtF(GAA)F 73 nt0.95□□□□□ -2.26
VHC1P38329 tF(GAA)GtF(GAA)G 73 nt0.95□□□□□ -2.26
VHC1P38329 tF(GAA)H1tF(GAA)H1 73 nt0.95□□□□□ -2.26
VHC1P38329 tF(GAA)H2tF(GAA)H2 73 nt0.95□□□□□ -2.26
VHC1P38329 tF(GAA)MtF(GAA)M 73 nt0.95□□□□□ -2.26
VHC1P38329 tF(GAA)P1tF(GAA)P1 73 nt0.95□□□□□ -2.26
VHC1P38329 tF(GAA)P2tF(GAA)P2 73 nt0.95□□□□□ -2.26
VHC1P38329 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
VHC1P38329 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
VHC1P38329 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
VHC1P38329 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
VHC1P38329 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
VHC1P38329 YGR069WYGR069W 336 nt0.95□□□□□ -2.26
VHC1P38329 YOR008C-AYOR008C-A 225 nt0.95□□□□□ -2.26
VHC1P38329 YDL073WYDL073W 2955 nt0.95□□□□□ -2.26
VHC1P38329 YOR282WYOR282W 321 nt0.94□□□□□ -2.26
VHC1P38329 ASE1YOR058C 2658 nt0.94□□□□□ -2.26
VHC1P38329 YOR231C-AYOR231C-A 201 nt0.93□□□□□ -2.26
VHC1P38329 BUD3YCL014W 4911 nt0.92□□□□□ -2.26
VHC1P38329 PRP16YKR086W 3216 nt0.92□□□□□ -2.26
VHC1P38329 PMP1YCR024C-A 123 nt0.92□□□□□ -2.26
VHC1P38329 YDR354C-AYDR354C-A 144 nt0.92□□□□□ -2.26
VHC1P38329 YEL020C-BYEL020C-B 198 nt0.92□□□□□ -2.26
VHC1P38329 YJL026C-AYJL026C-A 222 nt0.92□□□□□ -2.26
VHC1P38329 YMR172C-AYMR172C-A 384 nt0.92□□□□□ -2.26
VHC1P38329 BFR2YDR299W 1605 nt0.91□□□□□ -2.26
VHC1P38329 YJL197C-AYJL197C-A 282 nt0.91□□□□□ -2.26
VHC1P38329 YFR012W-AYFR012W-A 87 nt0.9□□□□□ -2.27
VHC1P38329 YGL052WYGL052W 306 nt0.9□□□□□ -2.27
VHC1P38329 YAL067W-AYAL067W-A 228 nt0.9□□□□□ -2.27
VHC1P38329 RPL26BYGR034W 384 nt0.89□□□□□ -2.27
VHC1P38329 YPR092WYPR092W 306 nt0.88□□□□□ -2.27
VHC1P38329 UTP20YBL004W 7482 nt0.87□□□□□ -2.27
VHC1P38329 YDL185C-AYDL185C-A 228 nt0.86□□□□□ -2.27
VHC1P38329 YLL019W-AYLL019W-A 93 nt0.85□□□□□ -2.27
VHC1P38329 YOR072W-BYOR072W-B 162 nt0.85□□□□□ -2.27
VHC1P38329 YPL152W-AYPL152W-A 99 nt0.85□□□□□ -2.27
VHC1P38329 snR74snR74 88 nt0.84□□□□□ -2.27
VHC1P38329 YER181CYER181C 324 nt0.84□□□□□ -2.27
VHC1P38329 RKR1YMR247C 4689 nt0.83□□□□□ -2.28
VHC1P38329 SEC8YPR055W 3198 nt0.82□□□□□ -2.28
VHC1P38329 YCR018C-AYCR018C-A 255 nt0.81□□□□□ -2.28
VHC1P38329 YIL142C-AYIL142C-A 333 nt0.8□□□□□ -2.28
VHC1P38329 YMR307C-AYMR307C-A 195 nt0.8□□□□□ -2.28
VHC1P38329 YOL014WYOL014W 375 nt0.8□□□□□ -2.28
VHC1P38329 snR190snR190 190 nt0.8□□□□□ -2.28
VHC1P38329 YPR160W-AYPR160W-A 81 nt0.8□□□□□ -2.28
VHC1P38329 SEC1YDR164C 2175 nt0.79□□□□□ -2.28
VHC1P38329 snR49snR49 165 nt0.79□□□□□ -2.28
VHC1P38329 NPR2YEL062W 1848 nt0.78□□□□□ -2.28
VHC1P38329 YHR063W-AYHR063W-A 336 nt0.78□□□□□ -2.28
VHC1P38329 YLR399W-AYLR399W-A 105 nt0.78□□□□□ -2.28
VHC1P38329 CHS6YJL099W 2241 nt0.78□□□□□ -2.28
VHC1P38329 HAL9YOL089C 3093 nt0.77□□□□□ -2.29
VHC1P38329 tF(GAA)QtF(GAA)Q 75 nt0.77□□□□□ -2.29
VHC1P38329 COY1YKL179C 2040 nt0.76□□□□□ -2.29
VHC1P38329 YIR030W-AYIR030W-A 384 nt0.76□□□□□ -2.29
VHC1P38329 YLR282CYLR282C 342 nt0.76□□□□□ -2.29
VHC1P38329 YMR160WYMR160W 2451 nt0.76□□□□□ -2.29
VHC1P38329 PRP5YBR237W 2550 nt0.75□□□□□ -2.29
VHC1P38329 FYV10YIL097W 1551 nt0.74□□□□□ -2.29
VHC1P38329 COX5BYIL111W 456 nt0.74□□□□□ -2.29
VHC1P38329 YML099W-AYML099W-A 330 nt0.74□□□□□ -2.29
VHC1P38329 snR55snR55 98 nt0.73□□□□□ -2.29
VHC1P38329 YGL123C-AYGL123C-A 231 nt0.73□□□□□ -2.29
VHC1P38329 YOR161W-AYOR161W-A 81 nt0.73□□□□□ -2.29
VHC1P38329 BLI1YKL061W 342 nt0.72□□□□□ -2.29
VHC1P38329 YBR182C-AYBR182C-A 195 nt0.72□□□□□ -2.29
VHC1P38329 YML002WYML002W 2214 nt0.72□□□□□ -2.29
VHC1P38329 YKU70YMR284W 1809 nt0.71□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms