Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.44■□□□□ 0.22
SNCAP37840 AC008175.2-201ENST00000612840 297 ntBASIC16.44■□□□□ 0.22
SNCAP37840 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
SNCAP37840 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNCAP37840 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNCAP37840 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNCAP37840 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNCAP37840 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNCAP37840 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNCAP37840 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SNCAP37840 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNCAP37840 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.44■□□□□ 0.22
SNCAP37840 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SNCAP37840 AC011484.1-201ENST00000377652 1995 ntBASIC16.44■□□□□ 0.22
SNCAP37840 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.44■□□□□ 0.22
SNCAP37840 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNCAP37840 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SNCAP37840 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNCAP37840 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNCAP37840 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.43■□□□□ 0.22
SNCAP37840 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.43■□□□□ 0.22
SNCAP37840 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SNCAP37840 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNCAP37840 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SNCAP37840 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNCAP37840 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.43■□□□□ 0.22
SNCAP37840 MIR939-201ENST00000401314 82 ntBASIC16.43■□□□□ 0.22
SNCAP37840 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.43■□□□□ 0.22
SNCAP37840 AC012414.1-201ENST00000556676 535 ntBASIC16.43■□□□□ 0.22
SNCAP37840 AL354811.1-201ENST00000610286 706 ntBASIC16.43■□□□□ 0.22
SNCAP37840 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNCAP37840 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNCAP37840 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNCAP37840 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNCAP37840 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.43■□□□□ 0.22
SNCAP37840 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNCAP37840 AC125437.2-201ENST00000625180 2167 ntBASIC16.43■□□□□ 0.22
SNCAP37840 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SNCAP37840 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.42■□□□□ 0.22
SNCAP37840 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SNCAP37840 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SNCAP37840 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.42■□□□□ 0.22
SNCAP37840 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.42■□□□□ 0.22
SNCAP37840 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNCAP37840 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNCAP37840 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.42■□□□□ 0.22
SNCAP37840 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.42■□□□□ 0.22
SNCAP37840 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNCAP37840 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SNCAP37840 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNCAP37840 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.42■□□□□ 0.22
SNCAP37840 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNCAP37840 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.42■□□□□ 0.22
SNCAP37840 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.42■□□□□ 0.22
SNCAP37840 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNCAP37840 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SNCAP37840 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.42■□□□□ 0.22
SNCAP37840 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.42■□□□□ 0.22
SNCAP37840 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNCAP37840 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SNCAP37840 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNCAP37840 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SNCAP37840 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNCAP37840 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SNCAP37840 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.42■□□□□ 0.22
SNCAP37840 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNCAP37840 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SNCAP37840 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SNCAP37840 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SNCAP37840 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SNCAP37840 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.41■□□□□ 0.22
SNCAP37840 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SNCAP37840 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.41■□□□□ 0.22
SNCAP37840 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 POU5F1P4-201ENST00000413175 1085 ntBASIC16.41■□□□□ 0.22
SNCAP37840 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.41■□□□□ 0.22
SNCAP37840 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.41■□□□□ 0.22
SNCAP37840 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.41■□□□□ 0.22
SNCAP37840 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.41■□□□□ 0.22
SNCAP37840 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.41■□□□□ 0.22
SNCAP37840 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.41■□□□□ 0.22
SNCAP37840 AC061975.6-201ENST00000579045 1553 ntBASIC16.41■□□□□ 0.22
SNCAP37840 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.41■□□□□ 0.22
SNCAP37840 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNCAP37840 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms