Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.05■□□□□ 0.64
RORAP35398 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RORAP35398 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.05■□□□□ 0.64
RORAP35398 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RORAP35398 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RORAP35398 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.05■□□□□ 0.64
RORAP35398 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RORAP35398 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RORAP35398 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.04■□□□□ 0.64
RORAP35398 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RORAP35398 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
RORAP35398 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.04■□□□□ 0.64
RORAP35398 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RORAP35398 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.04■□□□□ 0.64
RORAP35398 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.04■□□□□ 0.64
RORAP35398 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RORAP35398 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RORAP35398 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RORAP35398 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.04■□□□□ 0.64
RORAP35398 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RORAP35398 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RORAP35398 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RORAP35398 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
RORAP35398 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RORAP35398 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RORAP35398 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.03■□□□□ 0.64
RORAP35398 AC239809.2-201ENST00000415381 517 ntBASIC19.03■□□□□ 0.64
RORAP35398 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RORAP35398 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.03■□□□□ 0.64
RORAP35398 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.03■□□□□ 0.64
RORAP35398 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.03■□□□□ 0.64
RORAP35398 Z99916.2-201ENST00000604037 246 ntBASIC19.03■□□□□ 0.64
RORAP35398 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.03■□□□□ 0.64
RORAP35398 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RORAP35398 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
RORAP35398 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RORAP35398 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.03■□□□□ 0.64
RORAP35398 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RORAP35398 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RORAP35398 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RORAP35398 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RORAP35398 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RORAP35398 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RORAP35398 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
RORAP35398 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RORAP35398 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.02■□□□□ 0.64
RORAP35398 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RORAP35398 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RORAP35398 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
RORAP35398 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RORAP35398 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RORAP35398 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RORAP35398 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.02■□□□□ 0.64
RORAP35398 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RORAP35398 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.01■□□□□ 0.63
RORAP35398 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RORAP35398 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.01■□□□□ 0.63
RORAP35398 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RORAP35398 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
RORAP35398 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RORAP35398 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.01■□□□□ 0.63
RORAP35398 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RORAP35398 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.01■□□□□ 0.63
RORAP35398 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.01■□□□□ 0.63
RORAP35398 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.01■□□□□ 0.63
RORAP35398 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RORAP35398 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RORAP35398 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.01■□□□□ 0.63
RORAP35398 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RORAP35398 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RORAP35398 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RORAP35398 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RORAP35398 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RORAP35398 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RORAP35398 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19■□□□□ 0.63
RORAP35398 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19■□□□□ 0.63
RORAP35398 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19■□□□□ 0.63
RORAP35398 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19■□□□□ 0.63
RORAP35398 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RORAP35398 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
RORAP35398 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RORAP35398 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RORAP35398 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RORAP35398 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RORAP35398 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RORAP35398 KRASP1-201ENST00000407852 552 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms