Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.08■□□□□ 0.97
CHRNA3P32297 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHRNA3P32297 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHRNA3P32297 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHRNA3P32297 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.07■□□□□ 0.96
CHRNA3P32297 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA3P32297 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA3P32297 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHRNA3P32297 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.07■□□□□ 0.96
CHRNA3P32297 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHRNA3P32297 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.07■□□□□ 0.96
CHRNA3P32297 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA3P32297 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CHRNA3P32297 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.07■□□□□ 0.96
CHRNA3P32297 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.07■□□□□ 0.96
CHRNA3P32297 AL162412.1-201ENST00000567129 965 ntBASIC21.07■□□□□ 0.96
CHRNA3P32297 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.07■□□□□ 0.96
CHRNA3P32297 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.07■□□□□ 0.96
CHRNA3P32297 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.07■□□□□ 0.96
CHRNA3P32297 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA3P32297 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.07■□□□□ 0.96
CHRNA3P32297 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CHRNA3P32297 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.07■□□□□ 0.96
CHRNA3P32297 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CHRNA3P32297 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.07■□□□□ 0.96
CHRNA3P32297 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA3P32297 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA3P32297 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA3P32297 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA3P32297 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.06■□□□□ 0.96
CHRNA3P32297 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.06■□□□□ 0.96
CHRNA3P32297 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA3P32297 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA3P32297 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA3P32297 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHRNA3P32297 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CHRNA3P32297 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHRNA3P32297 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.06■□□□□ 0.96
CHRNA3P32297 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA3P32297 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.06■□□□□ 0.96
CHRNA3P32297 AC142086.2-201ENST00000569753 217 ntBASIC21.06■□□□□ 0.96
CHRNA3P32297 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.06■□□□□ 0.96
CHRNA3P32297 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHRNA3P32297 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA3P32297 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA3P32297 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA3P32297 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA3P32297 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA3P32297 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA3P32297 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.05■□□□□ 0.96
CHRNA3P32297 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.05■□□□□ 0.96
CHRNA3P32297 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA3P32297 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA3P32297 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.05■□□□□ 0.96
CHRNA3P32297 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA3P32297 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.05■□□□□ 0.96
CHRNA3P32297 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CHRNA3P32297 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA3P32297 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CHRNA3P32297 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.05■□□□□ 0.96
CHRNA3P32297 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA3P32297 AC016405.3-201ENST00000607710 860 ntBASIC21.05■□□□□ 0.96
CHRNA3P32297 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.05■□□□□ 0.96
CHRNA3P32297 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.05■□□□□ 0.96
CHRNA3P32297 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA3P32297 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
CHRNA3P32297 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.05■□□□□ 0.96
CHRNA3P32297 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.05■□□□□ 0.96
CHRNA3P32297 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CHRNA3P32297 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.04■□□□□ 0.96
CHRNA3P32297 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CHRNA3P32297 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA3P32297 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA3P32297 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CHRNA3P32297 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA3P32297 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA3P32297 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CHRNA3P32297 AC091799.1-201ENST00000422823 811 ntBASIC21.04■□□□□ 0.96
CHRNA3P32297 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.04■□□□□ 0.96
CHRNA3P32297 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.04■□□□□ 0.96
CHRNA3P32297 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
CHRNA3P32297 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.04■□□□□ 0.96
CHRNA3P32297 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CHRNA3P32297 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.04■□□□□ 0.96
CHRNA3P32297 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA3P32297 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA3P32297 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA3P32297 AC116562.4-201ENST00000641316 2276 ntBASIC21.03■□□□□ 0.96
CHRNA3P32297 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CHRNA3P32297 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.03■□□□□ 0.96
CHRNA3P32297 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHRNA3P32297 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHRNA3P32297 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHRNA3P32297 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHRNA3P32297 AL512625.2-201ENST00000417533 625 ntBASIC21.03■□□□□ 0.96
CHRNA3P32297 AC093787.1-201ENST00000450396 207 ntBASIC21.03■□□□□ 0.96
CHRNA3P32297 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.03■□□□□ 0.96
CHRNA3P32297 AL138781.1-201ENST00000566567 1274 ntBASIC21.03■□□□□ 0.96
CHRNA3P32297 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.03■□□□□ 0.96
CHRNA3P32297 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms