Protein–RNA interactions for Protein: P28007

GAR1, H/ACA ribonucleoprotein complex subunit GAR1, yeastyeast

Known RBP Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GAR1P28007 SEY1YOR165W 2331 nt2.45□□□□□ -2.02
GAR1P28007 BPT1YLL015W 4680 nt2.44□□□□□ -2.02
GAR1P28007 PMR1YGL167C 2853 nt2.44□□□□□ -2.02
GAR1P28007 UFD4YKL010C 4452 nt2.44□□□□□ -2.02
GAR1P28007 DYN1YKR054C 12279 nt2.44□□□□□ -2.02
GAR1P28007 SRB8YCR081W 4284 nt2.44□□□□□ -2.02
GAR1P28007 YHR086W-AYHR086W-A 162 nt2.43□□□□□ -2.02
GAR1P28007 ISW1YBR245C 3390 nt2.43□□□□□ -2.02
GAR1P28007 TRS130YMR218C 3309 nt2.42□□□□□ -2.02
GAR1P28007 JSN1YJR091C 3276 nt2.42□□□□□ -2.02
GAR1P28007 YER172C-AYER172C-A 381 nt2.42□□□□□ -2.02
GAR1P28007 YIL082W-AYIL082W-A 4497 nt2.42□□□□□ -2.02
GAR1P28007 GEA1YJR031C 4227 nt2.41□□□□□ -2.02
GAR1P28007 TRL1YJL087C 2484 nt2.41□□□□□ -2.02
GAR1P28007 YDL159C-BYDL159C-B 177 nt2.41□□□□□ -2.02
GAR1P28007 RIF1YBR275C 5751 nt2.41□□□□□ -2.02
GAR1P28007 YBT1YLL048C 4986 nt2.41□□□□□ -2.02
GAR1P28007 ILS1YBL076C 3219 nt2.4□□□□□ -2.02
GAR1P28007 BUD2YKL092C 3315 nt2.4□□□□□ -2.03
GAR1P28007 ANS1YHR126C 480 nt2.4□□□□□ -2.03
GAR1P28007 TUS1YLR425W 3924 nt2.39□□□□□ -2.03
GAR1P28007 YAL042C-AYAL042C-A 378 nt2.39□□□□□ -2.03
GAR1P28007 SAP1YER047C 2694 nt2.39□□□□□ -2.03
GAR1P28007 NST1YNL091W 3723 nt2.38□□□□□ -2.03
GAR1P28007 tF(GAA)DtF(GAA)D 73 nt2.38□□□□□ -2.03
GAR1P28007 tF(GAA)NtF(GAA)N 73 nt2.38□□□□□ -2.03
GAR1P28007 ESL2YKR096W 3588 nt2.38□□□□□ -2.03
GAR1P28007 CBF2YGR140W 2871 nt2.37□□□□□ -2.03
GAR1P28007 YGL063C-AYGL063C-A 150 nt2.37□□□□□ -2.03
GAR1P28007 ESL1YIL151C 3357 nt2.37□□□□□ -2.03
GAR1P28007 FLO11YIR019C 4104 nt2.36□□□□□ -2.03
GAR1P28007 EST2YLR318W 2655 nt2.36□□□□□ -2.03
GAR1P28007 GCN2YDR283C 4980 nt2.36□□□□□ -2.03
GAR1P28007 BCK1YJL095W 4437 nt2.36□□□□□ -2.03
GAR1P28007 NUM1YDR150W 8247 nt2.35□□□□□ -2.03
GAR1P28007 MRD1YPR112C 2664 nt2.35□□□□□ -2.03
GAR1P28007 PAN2YGL094C 3348 nt2.35□□□□□ -2.03
GAR1P28007 MOT1YPL082C 5604 nt2.35□□□□□ -2.03
GAR1P28007 AGC1YPR021C 2709 nt2.34□□□□□ -2.03
GAR1P28007 AMS1YGL156W 3252 nt2.34□□□□□ -2.03
GAR1P28007 BUB1YGR188C 3066 nt2.34□□□□□ -2.03
GAR1P28007 CYR1YJL005W 6081 nt2.34□□□□□ -2.03
GAR1P28007 PRP8YHR165C 7242 nt2.34□□□□□ -2.03
GAR1P28007 INP51YIL002C 2841 nt2.34□□□□□ -2.04
GAR1P28007 YCS4YLR272C 3531 nt2.34□□□□□ -2.04
GAR1P28007 YDR209CYDR209C 414 nt2.33□□□□□ -2.04
GAR1P28007 PDR1YGL013C 3207 nt2.32□□□□□ -2.04
GAR1P28007 NAB6YML117W 3405 nt2.32□□□□□ -2.04
GAR1P28007 TOM1YDR457W 9807 nt2.32□□□□□ -2.04
GAR1P28007 BUL2YML111W 2763 nt2.32□□□□□ -2.04
GAR1P28007 BEM3YPL115C 3387 nt2.3□□□□□ -2.04
GAR1P28007 TRA1YHR099W 11235 nt2.3□□□□□ -2.04
GAR1P28007 RDS3YPR094W 324 nt2.3□□□□□ -2.04
GAR1P28007 TOP2YNL088W 4287 nt2.29□□□□□ -2.04
GAR1P28007 YGR067CYGR067C 2415 nt2.29□□□□□ -2.04
GAR1P28007 MET18YIL128W 3099 nt2.28□□□□□ -2.04
GAR1P28007 ECM29YHL030W 5607 nt2.28□□□□□ -2.04
GAR1P28007 snR190snR190 190 nt2.28□□□□□ -2.04
GAR1P28007 FAR11YNL127W 2862 nt2.28□□□□□ -2.05
GAR1P28007 ESC1YMR219W 4977 nt2.27□□□□□ -2.05
GAR1P28007 snR69snR69 101 nt2.27□□□□□ -2.05
GAR1P28007 YPR160W-AYPR160W-A 81 nt2.27□□□□□ -2.05
GAR1P28007 NUT1YGL151W 3399 nt2.27□□□□□ -2.05
GAR1P28007 snR14snR14 160 nt2.26□□□□□ -2.05
GAR1P28007 SEC7YDR170C 6030 nt2.26□□□□□ -2.05
GAR1P28007 AXL1YPR122W 3627 nt2.25□□□□□ -2.05
GAR1P28007 YOR055WYOR055W 435 nt2.25□□□□□ -2.05
GAR1P28007 snR40snR40 97 nt2.24□□□□□ -2.05
GAR1P28007 NUP100YKL068W 2880 nt2.24□□□□□ -2.05
GAR1P28007 STO1YMR125W 2586 nt2.24□□□□□ -2.05
GAR1P28007 BNR1YIL159W 4128 nt2.23□□□□□ -2.05
GAR1P28007 TFC3YAL001C 3483 nt2.23□□□□□ -2.05
GAR1P28007 TDA9YML081W 3756 nt2.23□□□□□ -2.05
GAR1P28007 SMC6YLR383W 3345 nt2.22□□□□□ -2.05
GAR1P28007 KRE33YNL132W 3171 nt2.22□□□□□ -2.05
GAR1P28007 YOL019W-AYOL019W-A 153 nt2.22□□□□□ -2.05
GAR1P28007 CTR9YOL145C 3234 nt2.21□□□□□ -2.06
GAR1P28007 DNA2YHR164C 4569 nt2.21□□□□□ -2.06
GAR1P28007 MSH3YCR092C 3057 nt2.21□□□□□ -2.06
GAR1P28007 TOF1YNL273W 3717 nt2.2□□□□□ -2.06
GAR1P28007 MSH6YDR097C 3729 nt2.2□□□□□ -2.06
GAR1P28007 YAR009CYAR009C 3591 nt2.2□□□□□ -2.06
GAR1P28007 ULP2YIL031W 3105 nt2.19□□□□□ -2.06
GAR1P28007 RSE1YML049C 4086 nt2.18□□□□□ -2.06
GAR1P28007 tC(GCA)BtC(GCA)B 72 nt2.18□□□□□ -2.06
GAR1P28007 tC(GCA)GtC(GCA)G 72 nt2.18□□□□□ -2.06
GAR1P28007 tC(GCA)P1tC(GCA)P1 72 nt2.18□□□□□ -2.06
GAR1P28007 tC(GCA)P2tC(GCA)P2 72 nt2.18□□□□□ -2.06
GAR1P28007 YDR098C-BYDR098C-B 5268 nt2.18□□□□□ -2.06
GAR1P28007 YDR210C-DYDR210C-D 5268 nt2.18□□□□□ -2.06
GAR1P28007 YDR316W-BYDR316W-B 5268 nt2.18□□□□□ -2.06
GAR1P28007 YDR365W-BYDR365W-B 5268 nt2.18□□□□□ -2.06
GAR1P28007 YER138CYER138C 5268 nt2.18□□□□□ -2.06
GAR1P28007 YER160CYER160C 5268 nt2.18□□□□□ -2.06
GAR1P28007 YGR038C-BYGR038C-B 5268 nt2.18□□□□□ -2.06
GAR1P28007 YGR161C-DYGR161C-D 5268 nt2.18□□□□□ -2.06
GAR1P28007 YJR027WYJR027W 5268 nt2.18□□□□□ -2.06
GAR1P28007 YLR157C-BYLR157C-B 5268 nt2.18□□□□□ -2.06
GAR1P28007 YML039WYML039W 5268 nt2.18□□□□□ -2.06
GAR1P28007 YML045WYML045W 5268 nt2.18□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms