Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
BRD2P25440 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BRD2P25440 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.47■■□□□ 1.03
BRD2P25440 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
BRD2P25440 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.47■■□□□ 1.03
BRD2P25440 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.47■■□□□ 1.03
BRD2P25440 HLA-L-209ENST00000420110 1011 ntBASIC21.47■■□□□ 1.03
BRD2P25440 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
BRD2P25440 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.47■■□□□ 1.03
BRD2P25440 C2orf69P4-201ENST00000565394 541 ntBASIC21.47■■□□□ 1.03
BRD2P25440 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.47■■□□□ 1.03
BRD2P25440 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BRD2P25440 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BRD2P25440 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.47■■□□□ 1.03
BRD2P25440 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BRD2P25440 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.47■■□□□ 1.03
BRD2P25440 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRD2P25440 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRD2P25440 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.46■■□□□ 1.03
BRD2P25440 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
BRD2P25440 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
BRD2P25440 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
BRD2P25440 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
BRD2P25440 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
BRD2P25440 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRD2P25440 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRD2P25440 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
BRD2P25440 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.46■■□□□ 1.03
BRD2P25440 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.46■■□□□ 1.03
BRD2P25440 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.46■■□□□ 1.03
BRD2P25440 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
BRD2P25440 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.46■■□□□ 1.03
BRD2P25440 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRD2P25440 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRD2P25440 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
BRD2P25440 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRD2P25440 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
BRD2P25440 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.46■■□□□ 1.03
BRD2P25440 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRD2P25440 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
BRD2P25440 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRD2P25440 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
BRD2P25440 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.03
BRD2P25440 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRD2P25440 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.45■■□□□ 1.02
BRD2P25440 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRD2P25440 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
BRD2P25440 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
BRD2P25440 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
BRD2P25440 DUSP5P2-201ENST00000426873 1033 ntBASIC21.45■■□□□ 1.02
BRD2P25440 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.45■■□□□ 1.02
BRD2P25440 AC092118.2-201ENST00000613495 667 ntBASIC21.45■■□□□ 1.02
BRD2P25440 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRD2P25440 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.45■■□□□ 1.02
BRD2P25440 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
BRD2P25440 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
BRD2P25440 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.45■■□□□ 1.02
BRD2P25440 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRD2P25440 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRD2P25440 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRD2P25440 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRD2P25440 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRD2P25440 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRD2P25440 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRD2P25440 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BRD2P25440 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRD2P25440 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.44■■□□□ 1.02
BRD2P25440 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRD2P25440 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.44■■□□□ 1.02
BRD2P25440 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.44■■□□□ 1.02
BRD2P25440 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.44■■□□□ 1.02
BRD2P25440 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.44■■□□□ 1.02
BRD2P25440 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRD2P25440 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.44■■□□□ 1.02
BRD2P25440 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRD2P25440 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRD2P25440 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
BRD2P25440 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.44■■□□□ 1.02
BRD2P25440 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRD2P25440 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
BRD2P25440 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BRD2P25440 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BRD2P25440 ID1-201ENST00000376105 1233 ntBASIC21.43■■□□□ 1.02
BRD2P25440 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.43■■□□□ 1.02
BRD2P25440 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.43■■□□□ 1.02
BRD2P25440 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.43■■□□□ 1.02
BRD2P25440 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BRD2P25440 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BRD2P25440 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BRD2P25440 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BRD2P25440 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.43■■□□□ 1.02
BRD2P25440 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.43■■□□□ 1.02
BRD2P25440 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
BRD2P25440 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BRD2P25440 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.43■■□□□ 1.02
BRD2P25440 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.43■■□□□ 1.02
BRD2P25440 PTBP1P-201ENST00000554374 1601 ntBASIC21.43■■□□□ 1.02
BRD2P25440 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.43■■□□□ 1.02
BRD2P25440 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BRD2P25440 AC099778.1-201ENST00000568593 1911 ntBASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms