Protein–RNA interactions for Protein: P25037

UBP1, Ubiquitin carboxyl-terminal hydrolase 1, yeastyeast

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP1P25037 YHR214C-BYHR214C-B 5382 nt2.54□□□□□ -2
UBP1P25037 YOR093CYOR093C 4947 nt2.53□□□□□ -2
UBP1P25037 TFC3YAL001C 3483 nt2.52□□□□□ -2.01
UBP1P25037 FIG2YCR089W 4830 nt2.52□□□□□ -2.01
UBP1P25037 YDL118WYDL118W 381 nt2.52□□□□□ -2.01
UBP1P25037 YJL052C-AYJL052C-A 120 nt2.52□□□□□ -2.01
UBP1P25037 HSL1YKL101W 4557 nt2.51□□□□□ -2.01
UBP1P25037 MDS3YGL197W 4464 nt2.5□□□□□ -2.01
UBP1P25037 TOF1YNL273W 3717 nt2.5□□□□□ -2.01
UBP1P25037 SSK2YNR031C 4740 nt2.49□□□□□ -2.01
UBP1P25037 YCR087C-AYCR087C-A 462 nt2.49□□□□□ -2.01
UBP1P25037 SAP185YJL098W 3177 nt2.49□□□□□ -2.01
UBP1P25037 ADR1YDR216W 3972 nt2.49□□□□□ -2.01
UBP1P25037 RTT101YJL047C 2529 nt2.48□□□□□ -2.01
UBP1P25037 YPR097WYPR097W 3222 nt2.48□□□□□ -2.01
UBP1P25037 YHR180W-AYHR180W-A 183 nt2.48□□□□□ -2.01
UBP1P25037 LHS1YKL073W 2646 nt2.48□□□□□ -2.01
UBP1P25037 TUS1YLR425W 3924 nt2.48□□□□□ -2.01
UBP1P25037 UTP8YGR128C 2142 nt2.47□□□□□ -2.01
UBP1P25037 YGL041C-BYGL041C-B 183 nt2.47□□□□□ -2.01
UBP1P25037 YGL182CYGL182C 324 nt2.47□□□□□ -2.01
UBP1P25037 SEY1YOR165W 2331 nt2.47□□□□□ -2.01
UBP1P25037 BRE1YDL074C 2103 nt2.47□□□□□ -2.01
UBP1P25037 HIR3YJR140C 4947 nt2.46□□□□□ -2.01
UBP1P25037 YDL206WYDL206W 2289 nt2.46□□□□□ -2.02
UBP1P25037 TRM3YDL112W 4311 nt2.45□□□□□ -2.02
UBP1P25037 YAL067W-AYAL067W-A 228 nt2.43□□□□□ -2.02
UBP1P25037 DNF3YMR162C 4971 nt2.43□□□□□ -2.02
UBP1P25037 MSH6YDR097C 3729 nt2.42□□□□□ -2.02
UBP1P25037 BPH1YCR032W 6504 nt2.42□□□□□ -2.02
UBP1P25037 FKS1YLR342W 5631 nt2.42□□□□□ -2.02
UBP1P25037 YGL123C-AYGL123C-A 231 nt2.42□□□□□ -2.02
UBP1P25037 QCR9YGR183C 201 nt2.42□□□□□ -2.02
UBP1P25037 RGA1YOR127W 3024 nt2.41□□□□□ -2.02
UBP1P25037 YLL020CYLL020C 306 nt2.41□□□□□ -2.02
UBP1P25037 IST2YBR086C 2841 nt2.41□□□□□ -2.02
UBP1P25037 YJR039WYJR039W 3366 nt2.4□□□□□ -2.02
UBP1P25037 SPO24YPR036W-A 204 nt2.39□□□□□ -2.03
UBP1P25037 UFD2YDL190C 2886 nt2.39□□□□□ -2.03
UBP1P25037 BFR2YDR299W 1605 nt2.39□□□□□ -2.03
UBP1P25037 YBL039C-AYBL039C-A 84 nt2.37□□□□□ -2.03
UBP1P25037 STB6YKL072W 2301 nt2.37□□□□□ -2.03
UBP1P25037 UFD4YKL010C 4452 nt2.36□□□□□ -2.03
UBP1P25037 HER1YOR227W 3741 nt2.36□□□□□ -2.03
UBP1P25037 COA6YMR244C-A 315 nt2.36□□□□□ -2.03
UBP1P25037 RSM22YKL155C 1887 nt2.36□□□□□ -2.03
UBP1P25037 UTP21YLR409C 2820 nt2.36□□□□□ -2.03
UBP1P25037 DNF1YER166W 4716 nt2.36□□□□□ -2.03
UBP1P25037 GCN2YDR283C 4980 nt2.35□□□□□ -2.03
UBP1P25037 YKL100W-AYKL100W-A 90 nt2.35□□□□□ -2.03
UBP1P25037 YMR272W-BYMR272W-B 108 nt2.35□□□□□ -2.03
UBP1P25037 SEC63YOR254C 1992 nt2.34□□□□□ -2.03
UBP1P25037 PAU12YGR294W 363 nt2.34□□□□□ -2.03
UBP1P25037 YHR131W-AYHR131W-A 246 nt2.34□□□□□ -2.03
UBP1P25037 YOR161W-AYOR161W-A 81 nt2.34□□□□□ -2.03
UBP1P25037 PAU24YBR301W 363 nt2.34□□□□□ -2.03
UBP1P25037 YIL142C-AYIL142C-A 333 nt2.33□□□□□ -2.04
UBP1P25037 CHS1YNL192W 3396 nt2.33□□□□□ -2.04
UBP1P25037 snR39BsnR39B 96 nt2.32□□□□□ -2.04
UBP1P25037 CCH1YGR217W 6120 nt2.32□□□□□ -2.04
UBP1P25037 UBP2YOR124C 3819 nt2.32□□□□□ -2.04
UBP1P25037 RAD50YNL250W 3939 nt2.32□□□□□ -2.04
UBP1P25037 USO1YDL058W 5373 nt2.31□□□□□ -2.04
UBP1P25037 SMC1YFL008W 3678 nt2.31□□□□□ -2.04
UBP1P25037 TAH1YCR060W 336 nt2.31□□□□□ -2.04
UBP1P25037 YMR045CYMR045C 5268 nt2.3□□□□□ -2.04
UBP1P25037 POL5YEL055C 3069 nt2.29□□□□□ -2.04
UBP1P25037 TBS1YBR150C 3285 nt2.28□□□□□ -2.04
UBP1P25037 COX5BYIL111W 456 nt2.28□□□□□ -2.04
UBP1P25037 NUP157YER105C 4176 nt2.27□□□□□ -2.05
UBP1P25037 MYO2YOR326W 4725 nt2.27□□□□□ -2.05
UBP1P25037 NUT1YGL151W 3399 nt2.27□□□□□ -2.05
UBP1P25037 UBR2YLR024C 5619 nt2.26□□□□□ -2.05
UBP1P25037 MMS4YBR098W 2076 nt2.26□□□□□ -2.05
UBP1P25037 DGR1YNL130C-A 147 nt2.26□□□□□ -2.05
UBP1P25037 tM(CAU)Q2tM(CAU)Q2 78 nt2.25□□□□□ -2.05
UBP1P25037 EAF1YDR359C 2949 nt2.24□□□□□ -2.05
UBP1P25037 SPP41YDR464W 4308 nt2.24□□□□□ -2.05
UBP1P25037 SAC3YDR159W 3906 nt2.24□□□□□ -2.05
UBP1P25037 RCO1YMR075W 2055 nt2.24□□□□□ -2.05
UBP1P25037 YGR130CYGR130C 2451 nt2.23□□□□□ -2.05
UBP1P25037 EMC5YIL027C 426 nt2.23□□□□□ -2.05
UBP1P25037 YML002WYML002W 2214 nt2.23□□□□□ -2.05
UBP1P25037 PAN2YGL094C 3348 nt2.22□□□□□ -2.05
UBP1P25037 YLR419WYLR419W 4308 nt2.22□□□□□ -2.05
UBP1P25037 ALY2YJL084C 3141 nt2.22□□□□□ -2.05
UBP1P25037 YAR009CYAR009C 3591 nt2.22□□□□□ -2.05
UBP1P25037 MSH3YCR092C 3057 nt2.22□□□□□ -2.05
UBP1P25037 SLX4YLR135W 2247 nt2.21□□□□□ -2.06
UBP1P25037 tS(GCU)Q1tS(GCU)Q1 86 nt2.21□□□□□ -2.06
UBP1P25037 NEO1YIL048W 3456 nt2.21□□□□□ -2.06
UBP1P25037 SEC21YNL287W 2808 nt2.21□□□□□ -2.06
UBP1P25037 YLL066W-BYLL066W-B 171 nt2.2□□□□□ -2.06
UBP1P25037 PDR8YLR266C 2106 nt2.2□□□□□ -2.06
UBP1P25037 SMC4YLR086W 4257 nt2.19□□□□□ -2.06
UBP1P25037 CLU1YMR012W 3834 nt2.19□□□□□ -2.06
UBP1P25037 ATG9YDL149W 2994 nt2.19□□□□□ -2.06
UBP1P25037 snR14snR14 160 nt2.18□□□□□ -2.06
UBP1P25037 TDA9YML081W 3756 nt2.18□□□□□ -2.06
UBP1P25037 CFT1YDR301W 4074 nt2.17□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 6.7 ms