Protein–RNA interactions for Protein: P24276

SSD1, Protein SSD1, yeastyeast

Known RBP RIP-Chip data

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSD1P24276 EST2YLR318W 2655 nt1.75□□□□□ -2.13
SSD1P24276 ULI1YFR026C 510 nt1.75□□□□□ -2.13
SSD1P24276 YLR342W-AYLR342W-A 174 nt1.75□□□□□ -2.13
SSD1P24276 CDC25YLR310C 4770 nt1.75□□□□□ -2.13
SSD1P24276 MSN5YDR335W 3675 nt1.75□□□□□ -2.13
SSD1P24276 AZF1YOR113W 2745 nt1.75□□□□□ -2.13
SSD1P24276 YDL196WYDL196W 330 nt1.74□□□□□ -2.13
SSD1P24276 snR52snR52 92 nt1.74□□□□□ -2.13
SSD1P24276 YDL206WYDL206W 2289 nt1.74□□□□□ -2.13
SSD1P24276 PIP2YOR363C 2991 nt1.73□□□□□ -2.13
SSD1P24276 YDL007C-AYDL007C-A 258 nt1.73□□□□□ -2.13
SSD1P24276 Q0092Q0092 141 nt1.72□□□□□ -2.13
SSD1P24276 RPL33BYOR234C 324 nt1.71□□□□□ -2.14
SSD1P24276 SEC3YER008C 4011 nt1.71□□□□□ -2.14
SSD1P24276 YDR354C-AYDR354C-A 144 nt1.7□□□□□ -2.14
SSD1P24276 CHS1YNL192W 3396 nt1.7□□□□□ -2.14
SSD1P24276 NUP192YJL039C 5052 nt1.7□□□□□ -2.14
SSD1P24276 MEC1YBR136W 7107 nt1.69□□□□□ -2.14
SSD1P24276 SLD3YGL113W 2007 nt1.69□□□□□ -2.14
SSD1P24276 SWI4YER111C 3282 nt1.69□□□□□ -2.14
SSD1P24276 FIG4YNL325C 2640 nt1.69□□□□□ -2.14
SSD1P24276 PMP1YCR024C-A 123 nt1.68□□□□□ -2.14
SSD1P24276 NUP145YGL092W 3954 nt1.67□□□□□ -2.14
SSD1P24276 YIL134C-AYIL134C-A 204 nt1.67□□□□□ -2.14
SSD1P24276 snR14snR14 160 nt1.67□□□□□ -2.14
SSD1P24276 COY1YKL179C 2040 nt1.67□□□□□ -2.14
SSD1P24276 SPC110YDR356W 2835 nt1.66□□□□□ -2.14
SSD1P24276 PMD1YER132C 5262 nt1.66□□□□□ -2.14
SSD1P24276 YAR009CYAR009C 3591 nt1.65□□□□□ -2.15
SSD1P24276 CDC31YOR257W 486 nt1.65□□□□□ -2.15
SSD1P24276 ATP8Q0080 147 nt1.63□□□□□ -2.15
SSD1P24276 YJL026C-AYJL026C-A 222 nt1.63□□□□□ -2.15
SSD1P24276 SSK2YNR031C 4740 nt1.63□□□□□ -2.15
SSD1P24276 TRM732YMR259C 4263 nt1.63□□□□□ -2.15
SSD1P24276 CAT8YMR280C 4302 nt1.62□□□□□ -2.15
SSD1P24276 SEC21YNL287W 2808 nt1.62□□□□□ -2.15
SSD1P24276 SET3YKR029C 2256 nt1.62□□□□□ -2.15
SSD1P24276 IRA1YBR140C 9279 nt1.62□□□□□ -2.15
SSD1P24276 HAL9YOL089C 3093 nt1.62□□□□□ -2.15
SSD1P24276 RPS30BYOR182C 192 nt1.61□□□□□ -2.15
SSD1P24276 APL3YBL037W 3078 nt1.6□□□□□ -2.15
SSD1P24276 POL5YEL055C 3069 nt1.6□□□□□ -2.15
SSD1P24276 YOR381W-AYOR381W-A 168 nt1.6□□□□□ -2.15
SSD1P24276 STO1YMR125W 2586 nt1.6□□□□□ -2.15
SSD1P24276 PAA1YDR071C 576 nt1.59□□□□□ -2.15
SSD1P24276 APL1YJR005W 2103 nt1.59□□□□□ -2.15
SSD1P24276 COX12YLR038C 252 nt1.59□□□□□ -2.15
SSD1P24276 YBL053WYBL053W 375 nt1.59□□□□□ -2.15
SSD1P24276 SMC1YFL008W 3678 nt1.59□□□□□ -2.16
SSD1P24276 NUP157YER105C 4176 nt1.58□□□□□ -2.16
SSD1P24276 YBR200W-AYBR200W-A 165 nt1.58□□□□□ -2.16
SSD1P24276 YBR221W-AYBR221W-A 105 nt1.58□□□□□ -2.16
SSD1P24276 YLL020CYLL020C 306 nt1.57□□□□□ -2.16
SSD1P24276 RSM22YKL155C 1887 nt1.56□□□□□ -2.16
SSD1P24276 EAF1YDR359C 2949 nt1.56□□□□□ -2.16
SSD1P24276 YCR038W-AYCR038W-A 126 nt1.56□□□□□ -2.16
SSD1P24276 YEL073CYEL073C 324 nt1.56□□□□□ -2.16
SSD1P24276 YPL044CYPL044C 549 nt1.56□□□□□ -2.16
SSD1P24276 WAR1YML076C 2835 nt1.55□□□□□ -2.16
SSD1P24276 YOR170WYOR170W 306 nt1.55□□□□□ -2.16
SSD1P24276 PIK1YNL267W 3201 nt1.55□□□□□ -2.16
SSD1P24276 NUP188YML103C 4968 nt1.53□□□□□ -2.16
SSD1P24276 YAL067W-AYAL067W-A 228 nt1.53□□□□□ -2.16
SSD1P24276 YNL170WYNL170W 396 nt1.53□□□□□ -2.16
SSD1P24276 YNL211CYNL211C 261 nt1.53□□□□□ -2.16
SSD1P24276 MSH3YCR092C 3057 nt1.53□□□□□ -2.17
SSD1P24276 LAA1YJL207C 6045 nt1.52□□□□□ -2.17
SSD1P24276 CCH1YGR217W 6120 nt1.51□□□□□ -2.17
SSD1P24276 FIG2YCR089W 4830 nt1.5□□□□□ -2.17
SSD1P24276 TTI1YKL033W 3117 nt1.5□□□□□ -2.17
SSD1P24276 HKR1YDR420W 5409 nt1.5□□□□□ -2.17
SSD1P24276 tH(GUG)E1tH(GUG)E1 72 nt1.48□□□□□ -2.17
SSD1P24276 tH(GUG)E2tH(GUG)E2 72 nt1.48□□□□□ -2.17
SSD1P24276 tH(GUG)G1tH(GUG)G1 72 nt1.48□□□□□ -2.17
SSD1P24276 tH(GUG)G2tH(GUG)G2 72 nt1.48□□□□□ -2.17
SSD1P24276 tH(GUG)HtH(GUG)H 72 nt1.48□□□□□ -2.17
SSD1P24276 tH(GUG)KtH(GUG)K 72 nt1.48□□□□□ -2.17
SSD1P24276 tH(GUG)MtH(GUG)M 72 nt1.48□□□□□ -2.17
SSD1P24276 NOP9YJL010C 2001 nt1.48□□□□□ -2.17
SSD1P24276 PRP42YDR235W 1635 nt1.48□□□□□ -2.17
SSD1P24276 SDH6YDR379C-A 240 nt1.47□□□□□ -2.17
SSD1P24276 YGR164WYGR164W 336 nt1.47□□□□□ -2.17
SSD1P24276 CMC4YMR194C-B 222 nt1.47□□□□□ -2.17
SSD1P24276 YER053C-AYER053C-A 114 nt1.46□□□□□ -2.18
SSD1P24276 YIL002W-AYIL002W-A 210 nt1.46□□□□□ -2.18 RIP-Chip
SSD1P24276 RAD9YDR217C 3930 nt1.46□□□□□ -2.18
SSD1P24276 YIL020C-AYIL020C-A 339 nt1.45□□□□□ -2.18
SSD1P24276 YKL100W-AYKL100W-A 90 nt1.45□□□□□ -2.18
SSD1P24276 YOR161W-AYOR161W-A 81 nt1.45□□□□□ -2.18
SSD1P24276 CDC39YCR093W 6327 nt1.45□□□□□ -2.18
SSD1P24276 FYV8YGR196C 2454 nt1.44□□□□□ -2.18
SSD1P24276 STB6YKL072W 2301 nt1.44□□□□□ -2.18
SSD1P24276 RPL26BYGR034W 384 nt1.44□□□□□ -2.18
SSD1P24276 tQ(UUG)E2tQ(UUG)E2 72 nt1.44□□□□□ -2.18
SSD1P24276 GEA2YEL022W 4380 nt1.44□□□□□ -2.18
SSD1P24276 YFR012W-AYFR012W-A 87 nt1.43□□□□□ -2.18
SSD1P24276 YGL123C-AYGL123C-A 231 nt1.43□□□□□ -2.18
SSD1P24276 PET127YOR017W 2403 nt1.41□□□□□ -2.18
SSD1P24276 NST1YNL091W 3723 nt1.41□□□□□ -2.18
SSD1P24276 KAP120YPL125W 3099 nt1.4□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 34.2 ms