Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RAB3BP20337 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RAB3BP20337 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAB3BP20337 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RAB3BP20337 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.51■□□□□ 0.39
RAB3BP20337 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RAB3BP20337 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.51■□□□□ 0.39
RAB3BP20337 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
RAB3BP20337 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.51■□□□□ 0.39
RAB3BP20337 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.51■□□□□ 0.39
RAB3BP20337 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
RAB3BP20337 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
RAB3BP20337 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RAB3BP20337 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3BP20337 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
RAB3BP20337 TSPY26P-201ENST00000476365 1326 ntBASIC17.5■□□□□ 0.39
RAB3BP20337 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RAB3BP20337 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB3BP20337 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RAB3BP20337 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB3BP20337 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
RAB3BP20337 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
RAB3BP20337 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB3BP20337 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB3BP20337 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB3BP20337 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB3BP20337 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB3BP20337 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB3BP20337 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAB3BP20337 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RAB3BP20337 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.5■□□□□ 0.39
RAB3BP20337 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAB3BP20337 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB3BP20337 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB3BP20337 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3BP20337 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB3BP20337 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3BP20337 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB3BP20337 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RAB3BP20337 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3BP20337 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3BP20337 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB3BP20337 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3BP20337 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3BP20337 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3BP20337 AC131281.2-201ENST00000520478 145 ntBASIC17.49■□□□□ 0.39
RAB3BP20337 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.49■□□□□ 0.39
RAB3BP20337 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3BP20337 AC120498.10-201ENST00000621827 505 ntBASIC17.49■□□□□ 0.39
RAB3BP20337 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB3BP20337 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3BP20337 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
RAB3BP20337 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
RAB3BP20337 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB3BP20337 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB3BP20337 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RAB3BP20337 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3BP20337 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAB3BP20337 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
RAB3BP20337 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB3BP20337 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAB3BP20337 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB3BP20337 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB3BP20337 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB3BP20337 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB3BP20337 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
RAB3BP20337 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms