Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.83■□□□□ 0.6
CCNA2P20248 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNA2P20248 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA2P20248 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCNA2P20248 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.82■□□□□ 0.6
CCNA2P20248 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.82■□□□□ 0.6
CCNA2P20248 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA2P20248 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA2P20248 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA2P20248 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.82■□□□□ 0.6
CCNA2P20248 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA2P20248 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA2P20248 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA2P20248 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.82■□□□□ 0.6
CCNA2P20248 AC245052.3-201ENST00000450182 901 ntBASIC18.82■□□□□ 0.6
CCNA2P20248 AL162430.1-201ENST00000480705 870 ntBASIC18.82■□□□□ 0.6
CCNA2P20248 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.82■□□□□ 0.6
CCNA2P20248 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.82■□□□□ 0.6
CCNA2P20248 AC137761.2-201ENST00000561729 223 ntBASIC18.82■□□□□ 0.6
CCNA2P20248 AC145350.3-201ENST00000569033 163 ntBASIC18.82■□□□□ 0.6
CCNA2P20248 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.82■□□□□ 0.6
CCNA2P20248 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA2P20248 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CCNA2P20248 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCNA2P20248 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCNA2P20248 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CCNA2P20248 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.82■□□□□ 0.6
CCNA2P20248 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA2P20248 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA2P20248 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA2P20248 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA2P20248 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNA2P20248 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNA2P20248 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCNA2P20248 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNA2P20248 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNA2P20248 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNA2P20248 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCNA2P20248 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCNA2P20248 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.81■□□□□ 0.6
CCNA2P20248 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.81■□□□□ 0.6
CCNA2P20248 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.81■□□□□ 0.6
CCNA2P20248 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCNA2P20248 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCNA2P20248 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCNA2P20248 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCNA2P20248 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCNA2P20248 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNA2P20248 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCNA2P20248 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNA2P20248 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCNA2P20248 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNA2P20248 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.8■□□□□ 0.6
CCNA2P20248 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.8■□□□□ 0.6
CCNA2P20248 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.8■□□□□ 0.6
CCNA2P20248 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.8■□□□□ 0.6
CCNA2P20248 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.8■□□□□ 0.6
CCNA2P20248 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.8■□□□□ 0.6
CCNA2P20248 KRT18P20-201ENST00000548986 1279 ntBASIC18.8■□□□□ 0.6
CCNA2P20248 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.8■□□□□ 0.6
CCNA2P20248 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.8■□□□□ 0.6
CCNA2P20248 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCNA2P20248 RARRES2P11-201ENST00000635158 484 ntBASIC18.8■□□□□ 0.6
CCNA2P20248 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.8■□□□□ 0.6
CCNA2P20248 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.8■□□□□ 0.6
CCNA2P20248 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNA2P20248 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNA2P20248 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNA2P20248 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNA2P20248 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCNA2P20248 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNA2P20248 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNA2P20248 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCNA2P20248 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCNA2P20248 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNA2P20248 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNA2P20248 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNA2P20248 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNA2P20248 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCNA2P20248 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCNA2P20248 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNA2P20248 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNA2P20248 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNA2P20248 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCNA2P20248 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCNA2P20248 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNA2P20248 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.79■□□□□ 0.6
CCNA2P20248 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNA2P20248 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCNA2P20248 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.79■□□□□ 0.6
CCNA2P20248 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.79■□□□□ 0.6
CCNA2P20248 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.79■□□□□ 0.6
CCNA2P20248 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCNA2P20248 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.79■□□□□ 0.6
CCNA2P20248 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNA2P20248 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCNA2P20248 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.79■□□□□ 0.6
CCNA2P20248 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.79■□□□□ 0.6
CCNA2P20248 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNA2P20248 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms