Protein–RNA interactions for Protein: P18480

SNF5, SWI/SNF chromatin-remodeling complex subunit SNF5, yeastyeast

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF5P18480 SSD1YDR293C 3753 nt2.03□□□□□ -2.08
SNF5P18480 SEC63YOR254C 1992 nt2.03□□□□□ -2.08
SNF5P18480 MYO4YAL029C 4416 nt2.03□□□□□ -2.09
SNF5P18480 LHS1YKL073W 2646 nt2.03□□□□□ -2.09
SNF5P18480 VPS13YLL040C 9435 nt2.02□□□□□ -2.09
SNF5P18480 YAL067W-AYAL067W-A 228 nt2.02□□□□□ -2.09
SNF5P18480 YOL098CYOL098C 3114 nt2.02□□□□□ -2.09
SNF5P18480 YER172C-AYER172C-A 381 nt2.01□□□□□ -2.09
SNF5P18480 YGL182CYGL182C 324 nt2.01□□□□□ -2.09
SNF5P18480 GCN2YDR283C 4980 nt2.01□□□□□ -2.09
SNF5P18480 TFC3YAL001C 3483 nt2.01□□□□□ -2.09
SNF5P18480 GYP5YPL249C 2685 nt2.01□□□□□ -2.09
SNF5P18480 YGL123C-AYGL123C-A 231 nt2□□□□□ -2.09
SNF5P18480 IRC8YJL051W 2469 nt1.99□□□□□ -2.09
SNF5P18480 TOR2YKL203C 7425 nt1.99□□□□□ -2.09
SNF5P18480 YNL067W-BYNL067W-B 141 nt1.99□□□□□ -2.09
SNF5P18480 YMR045CYMR045C 5268 nt1.99□□□□□ -2.09
SNF5P18480 RAD50YNL250W 3939 nt1.98□□□□□ -2.09
SNF5P18480 RSM22YKL155C 1887 nt1.98□□□□□ -2.09
SNF5P18480 SPP41YDR464W 4308 nt1.98□□□□□ -2.09
SNF5P18480 UFD2YDL190C 2886 nt1.98□□□□□ -2.09
SNF5P18480 KIP1YBL063W 3336 nt1.97□□□□□ -2.09
SNF5P18480 SMC1YFL008W 3678 nt1.97□□□□□ -2.09
SNF5P18480 YLL020CYLL020C 306 nt1.97□□□□□ -2.09
SNF5P18480 SEC16YPL085W 6588 nt1.96□□□□□ -2.09
SNF5P18480 QCR9YGR183C 201 nt1.96□□□□□ -2.1
SNF5P18480 UBR2YLR024C 5619 nt1.96□□□□□ -2.1
SNF5P18480 YKL100W-AYKL100W-A 90 nt1.95□□□□□ -2.1
SNF5P18480 COA6YMR244C-A 315 nt1.95□□□□□ -2.1
SNF5P18480 BFR2YDR299W 1605 nt1.95□□□□□ -2.1
SNF5P18480 SBH1YER087C-B 249 nt1.94□□□□□ -2.1
SNF5P18480 YJL052C-AYJL052C-A 120 nt1.94□□□□□ -2.1
SNF5P18480 SEC31YDL195W 3822 nt1.93□□□□□ -2.1
SNF5P18480 MMS4YBR098W 2076 nt1.93□□□□□ -2.1
SNF5P18480 NUT1YGL151W 3399 nt1.92□□□□□ -2.1
SNF5P18480 YBL039C-AYBL039C-A 84 nt1.92□□□□□ -2.1
SNF5P18480 YOR161W-AYOR161W-A 81 nt1.92□□□□□ -2.1
SNF5P18480 TRM3YDL112W 4311 nt1.92□□□□□ -2.1
SNF5P18480 TDA9YML081W 3756 nt1.92□□□□□ -2.1
SNF5P18480 YJR039WYJR039W 3366 nt1.91□□□□□ -2.1
SNF5P18480 EMC5YIL027C 426 nt1.91□□□□□ -2.1
SNF5P18480 YLR422WYLR422W 5799 nt1.91□□□□□ -2.1
SNF5P18480 YGL041C-BYGL041C-B 183 nt1.9□□□□□ -2.11
SNF5P18480 POL5YEL055C 3069 nt1.89□□□□□ -2.11
SNF5P18480 TBS1YBR150C 3285 nt1.89□□□□□ -2.11
SNF5P18480 TAH1YCR060W 336 nt1.89□□□□□ -2.11
SNF5P18480 ATG9YDL149W 2994 nt1.89□□□□□ -2.11
SNF5P18480 COX5BYIL111W 456 nt1.89□□□□□ -2.11
SNF5P18480 YOR093CYOR093C 4947 nt1.89□□□□□ -2.11
SNF5P18480 STB6YKL072W 2301 nt1.89□□□□□ -2.11
SNF5P18480 BRE1YDL074C 2103 nt1.88□□□□□ -2.11
SNF5P18480 PDR8YLR266C 2106 nt1.88□□□□□ -2.11
SNF5P18480 STF2YGR008C 255 nt1.88□□□□□ -2.11
SNF5P18480 SLX4YLR135W 2247 nt1.88□□□□□ -2.11
SNF5P18480 YLR419WYLR419W 4308 nt1.88□□□□□ -2.11
SNF5P18480 ALY2YJL084C 3141 nt1.88□□□□□ -2.11
SNF5P18480 SMC4YLR086W 4257 nt1.88□□□□□ -2.11
SNF5P18480 PAN2YGL094C 3348 nt1.88□□□□□ -2.11
SNF5P18480 RGA1YOR127W 3024 nt1.87□□□□□ -2.11
SNF5P18480 YAR009CYAR009C 3591 nt1.87□□□□□ -2.11
SNF5P18480 UBP2YOR124C 3819 nt1.86□□□□□ -2.11
SNF5P18480 INO80YGL150C 4470 nt1.85□□□□□ -2.11
SNF5P18480 YML002WYML002W 2214 nt1.85□□□□□ -2.11
SNF5P18480 tM(CAU)Q2tM(CAU)Q2 78 nt1.85□□□□□ -2.11
SNF5P18480 YHR131W-AYHR131W-A 246 nt1.85□□□□□ -2.11
SNF5P18480 MGA2YIR033W 3342 nt1.84□□□□□ -2.11
SNF5P18480 snR14snR14 160 nt1.84□□□□□ -2.11
SNF5P18480 snR39BsnR39B 96 nt1.84□□□□□ -2.11
SNF5P18480 NUP157YER105C 4176 nt1.83□□□□□ -2.12
SNF5P18480 SEC21YNL287W 2808 nt1.82□□□□□ -2.12
SNF5P18480 DGR1YNL130C-A 147 nt1.82□□□□□ -2.12
SNF5P18480 EAF1YDR359C 2949 nt1.81□□□□□ -2.12
SNF5P18480 YMR272W-BYMR272W-B 108 nt1.81□□□□□ -2.12
SNF5P18480 PMD1YER132C 5262 nt1.8□□□□□ -2.12
SNF5P18480 IRC20YLR247C 4671 nt1.8□□□□□ -2.12
SNF5P18480 UFD4YKL010C 4452 nt1.79□□□□□ -2.12
SNF5P18480 SKI3YPR189W 4299 nt1.79□□□□□ -2.12
SNF5P18480 FYV10YIL097W 1551 nt1.77□□□□□ -2.13
SNF5P18480 STO1YMR125W 2586 nt1.77□□□□□ -2.13
SNF5P18480 NOP9YJL010C 2001 nt1.76□□□□□ -2.13
SNF5P18480 YHR214C-BYHR214C-B 5382 nt1.76□□□□□ -2.13
SNF5P18480 YLR232WYLR232W 348 nt1.76□□□□□ -2.13
SNF5P18480 MON2YNL297C 4911 nt1.76□□□□□ -2.13
SNF5P18480 RTP1YMR185W 2946 nt1.75□□□□□ -2.13
SNF5P18480 KCS1YDR017C 3153 nt1.75□□□□□ -2.13
SNF5P18480 MYO2YOR326W 4725 nt1.75□□□□□ -2.13
SNF5P18480 GEA2YEL022W 4380 nt1.75□□□□□ -2.13
SNF5P18480 WAR1YML076C 2835 nt1.74□□□□□ -2.13
SNF5P18480 SET3YKR029C 2256 nt1.73□□□□□ -2.13
SNF5P18480 FKS1YLR342W 5631 nt1.73□□□□□ -2.13
SNF5P18480 YIL142C-AYIL142C-A 333 nt1.73□□□□□ -2.13
SNF5P18480 YJL127W-AYJL127W-A 117 nt1.73□□□□□ -2.13
SNF5P18480 TMA7YLR262C-A 195 nt1.73□□□□□ -2.13
SNF5P18480 FIG2YCR089W 4830 nt1.73□□□□□ -2.13
SNF5P18480 KAP122YGL016W 3246 nt1.72□□□□□ -2.13
SNF5P18480 RPL26BYGR034W 384 nt1.72□□□□□ -2.13
SNF5P18480 snR190snR190 190 nt1.72□□□□□ -2.13
SNF5P18480 RCO1YMR075W 2055 nt1.71□□□□□ -2.13
SNF5P18480 APL3YBL037W 3078 nt1.7□□□□□ -2.14
SNF5P18480 DNF3YMR162C 4971 nt1.7□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms