Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.88■□□□□ 0.61
TPRP12270 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.88■□□□□ 0.61
TPRP12270 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPRP12270 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPRP12270 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPRP12270 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPRP12270 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TPRP12270 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TPRP12270 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPRP12270 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPRP12270 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPRP12270 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TPRP12270 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TPRP12270 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPRP12270 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TPRP12270 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
TPRP12270 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.87■□□□□ 0.61
TPRP12270 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TPRP12270 AC142381.3-201ENST00000568208 1670 ntBASIC18.87■□□□□ 0.61
TPRP12270 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPRP12270 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPRP12270 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPRP12270 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.86■□□□□ 0.61
TPRP12270 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.86■□□□□ 0.61
TPRP12270 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TPRP12270 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPRP12270 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPRP12270 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.86■□□□□ 0.61
TPRP12270 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.86■□□□□ 0.61
TPRP12270 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPRP12270 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPRP12270 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
TPRP12270 BX640515.1-201ENST00000617215 977 ntBASIC18.86■□□□□ 0.61
TPRP12270 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TPRP12270 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TPRP12270 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPRP12270 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPRP12270 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.86■□□□□ 0.61
TPRP12270 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.85■□□□□ 0.61
TPRP12270 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPRP12270 AC004951.3-201ENST00000418645 1148 ntBASIC18.85■□□□□ 0.61
TPRP12270 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.85■□□□□ 0.61
TPRP12270 AC092865.5-201ENST00000545435 363 ntBASIC18.85■□□□□ 0.61
TPRP12270 AL662844.1-201ENST00000546340 181 ntBASIC18.85■□□□□ 0.61
TPRP12270 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPRP12270 AC137767.1-201ENST00000602918 1920 ntBASIC18.85■□□□□ 0.61
TPRP12270 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPRP12270 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPRP12270 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPRP12270 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPRP12270 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
TPRP12270 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TPRP12270 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.85■□□□□ 0.61
TPRP12270 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPRP12270 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.85■□□□□ 0.61
TPRP12270 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.85■□□□□ 0.61
TPRP12270 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.85■□□□□ 0.61
TPRP12270 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.85■□□□□ 0.61
TPRP12270 AC092053.2-201ENST00000640557 1818 ntBASIC18.85■□□□□ 0.61
TPRP12270 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
TPRP12270 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPRP12270 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.84■□□□□ 0.61
TPRP12270 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
TPRP12270 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPRP12270 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.84■□□□□ 0.61
TPRP12270 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.84■□□□□ 0.61
TPRP12270 AL031432.5-201ENST00000641059 760 ntBASIC18.84■□□□□ 0.61
TPRP12270 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPRP12270 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPRP12270 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPRP12270 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPRP12270 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPRP12270 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPRP12270 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPRP12270 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPRP12270 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.84■□□□□ 0.61
TPRP12270 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.84■□□□□ 0.61
TPRP12270 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.84■□□□□ 0.61
TPRP12270 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.84■□□□□ 0.61
TPRP12270 AC140113.3-201ENST00000605663 199 ntBASIC18.84■□□□□ 0.61
TPRP12270 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPRP12270 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPRP12270 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TPRP12270 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
TPRP12270 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
TPRP12270 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPRP12270 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPRP12270 PRELID1P1-202ENST00000567272 903 ntBASIC18.83■□□□□ 0.61
TPRP12270 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.83■□□□□ 0.61
TPRP12270 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TPRP12270 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPRP12270 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPRP12270 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPRP12270 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.83■□□□□ 0.6
TPRP12270 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.83■□□□□ 0.6
TPRP12270 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPRP12270 PRSS44-201ENST00000515154 1146 ntBASIC18.83■□□□□ 0.6
TPRP12270 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TPRP12270 AL732292.2-201ENST00000609649 430 ntBASIC18.83■□□□□ 0.6
TPRP12270 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms