Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HNRNPCL4P0DMR1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HNRNPCL4P0DMR1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.6■□□□□ 0.57
HNRNPCL4P0DMR1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HNRNPCL4P0DMR1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.6■□□□□ 0.57
HNRNPCL4P0DMR1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HNRNPCL4P0DMR1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.6■□□□□ 0.57
HNRNPCL4P0DMR1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.6■□□□□ 0.57
HNRNPCL4P0DMR1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.6■□□□□ 0.57
HNRNPCL4P0DMR1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HNRNPCL4P0DMR1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 RARRES2P6-201ENST00000567333 442 ntBASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.59■□□□□ 0.57
HNRNPCL4P0DMR1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.58■□□□□ 0.57
HNRNPCL4P0DMR1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HNRNPCL4P0DMR1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.58■□□□□ 0.57
HNRNPCL4P0DMR1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
HNRNPCL4P0DMR1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.58■□□□□ 0.57
HNRNPCL4P0DMR1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.58■□□□□ 0.57
HNRNPCL4P0DMR1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
HNRNPCL4P0DMR1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HNRNPCL4P0DMR1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.58■□□□□ 0.57
HNRNPCL4P0DMR1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HNRNPCL4P0DMR1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 KRT18P68-201ENST00000392293 1000 ntBASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 AC069236.1-201ENST00000604339 616 ntBASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HNRNPCL4P0DMR1 KRT8P17-201ENST00000453110 1448 ntBASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 BID-214ENST00000617586 542 ntTSL 5 BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 AC105020.6-201ENST00000621523 1217 ntBASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 AC231657.2-201ENST00000624556 255 ntBASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 AC008694.1-202ENST00000636953 945 ntBASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 AC125437.2-201ENST00000625180 2167 ntBASIC18.57■□□□□ 0.56
HNRNPCL4P0DMR1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 PTBP1P-201ENST00000554374 1601 ntBASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.56■□□□□ 0.56
HNRNPCL4P0DMR1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HNRNPCL4P0DMR1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HNRNPCL4P0DMR1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms