Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.86■□□□□ 0.61
MT-ND1P03886 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.86■□□□□ 0.61
MT-ND1P03886 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.86■□□□□ 0.61
MT-ND1P03886 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-ND1P03886 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
MT-ND1P03886 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MT-ND1P03886 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-ND1P03886 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-ND1P03886 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
MT-ND1P03886 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-ND1P03886 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MT-ND1P03886 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MT-ND1P03886 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.85■□□□□ 0.61
MT-ND1P03886 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MT-ND1P03886 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.85■□□□□ 0.61
MT-ND1P03886 AC027612.3-201ENST00000413684 1047 ntBASIC18.85■□□□□ 0.61
MT-ND1P03886 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MT-ND1P03886 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-ND1P03886 AC008175.2-201ENST00000612840 297 ntBASIC18.85■□□□□ 0.61
MT-ND1P03886 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
MT-ND1P03886 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MT-ND1P03886 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
MT-ND1P03886 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-ND1P03886 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.85■□□□□ 0.61
MT-ND1P03886 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MT-ND1P03886 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MT-ND1P03886 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MT-ND1P03886 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MT-ND1P03886 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MT-ND1P03886 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MT-ND1P03886 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.84■□□□□ 0.61
MT-ND1P03886 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
MT-ND1P03886 POU5F1P4-201ENST00000413175 1085 ntBASIC18.84■□□□□ 0.61
MT-ND1P03886 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MT-ND1P03886 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MT-ND1P03886 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MT-ND1P03886 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.84■□□□□ 0.61
MT-ND1P03886 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.84■□□□□ 0.61
MT-ND1P03886 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MT-ND1P03886 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MT-ND1P03886 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.83■□□□□ 0.61
MT-ND1P03886 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
MT-ND1P03886 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MT-ND1P03886 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MT-ND1P03886 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
MT-ND1P03886 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MT-ND1P03886 AC245052.3-201ENST00000450182 901 ntBASIC18.83■□□□□ 0.6
MT-ND1P03886 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.83■□□□□ 0.6
MT-ND1P03886 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
MT-ND1P03886 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.83■□□□□ 0.6
MT-ND1P03886 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.83■□□□□ 0.6
MT-ND1P03886 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
MT-ND1P03886 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MT-ND1P03886 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MT-ND1P03886 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MT-ND1P03886 TREX1-205ENST00000625293 1783 ntBASIC18.83■□□□□ 0.6
MT-ND1P03886 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MT-ND1P03886 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.83■□□□□ 0.6
MT-ND1P03886 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
MT-ND1P03886 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 TMEM179-206ENST00000616017 1645 ntBASIC18.82■□□□□ 0.6
MT-ND1P03886 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MT-ND1P03886 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.82■□□□□ 0.6
MT-ND1P03886 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.82■□□□□ 0.6
MT-ND1P03886 NEFHP1-201ENST00000412845 2629 ntBASIC18.82■□□□□ 0.6
MT-ND1P03886 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.82■□□□□ 0.6
MT-ND1P03886 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MT-ND1P03886 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.82■□□□□ 0.6
MT-ND1P03886 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.82■□□□□ 0.6
MT-ND1P03886 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.82■□□□□ 0.6
MT-ND1P03886 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.82■□□□□ 0.6
MT-ND1P03886 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MT-ND1P03886 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND1P03886 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.82■□□□□ 0.6
MT-ND1P03886 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND1P03886 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND1P03886 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND1P03886 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND1P03886 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND1P03886 MIR638-201ENST00000385237 100 ntBASIC18.81■□□□□ 0.6
MT-ND1P03886 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms