Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.28■□□□□ 0.84
PDGFBP01127 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.28■□□□□ 0.84
PDGFBP01127 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFBP01127 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFBP01127 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFBP01127 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.27■□□□□ 0.84
PDGFBP01127 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PDGFBP01127 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFBP01127 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.27■□□□□ 0.84
PDGFBP01127 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PDGFBP01127 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.27■□□□□ 0.84
PDGFBP01127 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.27■□□□□ 0.84
PDGFBP01127 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.27■□□□□ 0.84
PDGFBP01127 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.27■□□□□ 0.84
PDGFBP01127 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.27■□□□□ 0.84
PDGFBP01127 AC012313.10-201ENST00000623509 926 ntBASIC20.27■□□□□ 0.84
PDGFBP01127 AL121956.5-201ENST00000625261 221 ntBASIC20.27■□□□□ 0.84
PDGFBP01127 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFBP01127 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
PDGFBP01127 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PDGFBP01127 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFBP01127 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFBP01127 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFBP01127 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDGFBP01127 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFBP01127 AC026271.3-201ENST00000571884 352 ntBASIC20.26■□□□□ 0.83
PDGFBP01127 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.26■□□□□ 0.83
PDGFBP01127 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFBP01127 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFBP01127 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFBP01127 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.26■□□□□ 0.83
PDGFBP01127 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFBP01127 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFBP01127 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFBP01127 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFBP01127 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PDGFBP01127 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.25■□□□□ 0.83
PDGFBP01127 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.25■□□□□ 0.83
PDGFBP01127 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.25■□□□□ 0.83
PDGFBP01127 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFBP01127 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFBP01127 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.25■□□□□ 0.83
PDGFBP01127 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFBP01127 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFBP01127 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFBP01127 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PDGFBP01127 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFBP01127 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.25■□□□□ 0.83
PDGFBP01127 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.25■□□□□ 0.83
PDGFBP01127 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PDGFBP01127 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PDGFBP01127 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFBP01127 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.25■□□□□ 0.83
PDGFBP01127 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFBP01127 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.25■□□□□ 0.83
PDGFBP01127 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.25■□□□□ 0.83
PDGFBP01127 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.25■□□□□ 0.83
PDGFBP01127 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFBP01127 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFBP01127 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
PDGFBP01127 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFBP01127 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFBP01127 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.24■□□□□ 0.83
PDGFBP01127 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFBP01127 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFBP01127 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFBP01127 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.24■□□□□ 0.83
PDGFBP01127 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.24■□□□□ 0.83
PDGFBP01127 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.24■□□□□ 0.83
PDGFBP01127 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFBP01127 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.24■□□□□ 0.83
PDGFBP01127 COX11P1-201ENST00000489116 835 ntBASIC20.24■□□□□ 0.83
PDGFBP01127 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.24■□□□□ 0.83
PDGFBP01127 SLC25A1P4-201ENST00000567977 778 ntBASIC20.24■□□□□ 0.83
PDGFBP01127 AL445675.2-201ENST00000620291 557 ntBASIC20.24■□□□□ 0.83
PDGFBP01127 AC011558.1-201ENST00000623459 338 ntBASIC20.24■□□□□ 0.83
PDGFBP01127 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.24■□□□□ 0.83
PDGFBP01127 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFBP01127 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.24■□□□□ 0.83
PDGFBP01127 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFBP01127 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFBP01127 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFBP01127 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.23■□□□□ 0.83
PDGFBP01127 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFBP01127 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFBP01127 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.23■□□□□ 0.83
PDGFBP01127 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFBP01127 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.23■□□□□ 0.83
PDGFBP01127 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFBP01127 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.23■□□□□ 0.83
PDGFBP01127 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFBP01127 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.23■□□□□ 0.83
PDGFBP01127 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFBP01127 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDGFBP01127 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDGFBP01127 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PDGFBP01127 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.22■□□□□ 0.83
PDGFBP01127 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.22■□□□□ 0.83
PDGFBP01127 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.22■□□□□ 0.83
PDGFBP01127 C1QL1P1-201ENST00000568105 661 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms