Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PPP1R3DO95685 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
PPP1R3DO95685 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
PPP1R3DO95685 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PPP1R3DO95685 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PPP1R3DO95685 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPP1R3DO95685 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPP1R3DO95685 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.07■□□□□ 0.48
PPP1R3DO95685 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.07■□□□□ 0.48
PPP1R3DO95685 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.07■□□□□ 0.48
PPP1R3DO95685 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPP1R3DO95685 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PPP1R3DO95685 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PPP1R3DO95685 AC034268.1-201ENST00000441047 882 ntBASIC18.07■□□□□ 0.48
PPP1R3DO95685 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.07■□□□□ 0.48
PPP1R3DO95685 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PPP1R3DO95685 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.07■□□□□ 0.48
PPP1R3DO95685 AC016405.3-201ENST00000607710 860 ntBASIC18.07■□□□□ 0.48
PPP1R3DO95685 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPP1R3DO95685 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPP1R3DO95685 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PPP1R3DO95685 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPP1R3DO95685 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.07■□□□□ 0.48
PPP1R3DO95685 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPP1R3DO95685 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.07■□□□□ 0.48
PPP1R3DO95685 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.07■□□□□ 0.48
PPP1R3DO95685 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.07■□□□□ 0.48
PPP1R3DO95685 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPP1R3DO95685 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPP1R3DO95685 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPP1R3DO95685 AIRN-201ENST00000601203 4374 ntBASIC18.06■□□□□ 0.48
PPP1R3DO95685 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
PPP1R3DO95685 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPP1R3DO95685 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPP1R3DO95685 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PPP1R3DO95685 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.06■□□□□ 0.48
PPP1R3DO95685 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPP1R3DO95685 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.06■□□□□ 0.48
PPP1R3DO95685 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PPP1R3DO95685 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PPP1R3DO95685 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.06■□□□□ 0.48
PPP1R3DO95685 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.06■□□□□ 0.48
PPP1R3DO95685 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PPP1R3DO95685 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPP1R3DO95685 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPP1R3DO95685 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.06■□□□□ 0.48
PPP1R3DO95685 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPP1R3DO95685 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PPP1R3DO95685 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PPP1R3DO95685 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PPP1R3DO95685 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.05■□□□□ 0.48
PPP1R3DO95685 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PPP1R3DO95685 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.05■□□□□ 0.48
PPP1R3DO95685 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.05■□□□□ 0.48
PPP1R3DO95685 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPP1R3DO95685 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PPP1R3DO95685 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPP1R3DO95685 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.05■□□□□ 0.48
PPP1R3DO95685 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPP1R3DO95685 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPP1R3DO95685 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PPP1R3DO95685 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPP1R3DO95685 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPP1R3DO95685 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.05■□□□□ 0.48
PPP1R3DO95685 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PPP1R3DO95685 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PPP1R3DO95685 MIR6821-201ENST00000617625 74 ntBASIC18.05■□□□□ 0.48
PPP1R3DO95685 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PPP1R3DO95685 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPP1R3DO95685 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.05■□□□□ 0.48
PPP1R3DO95685 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPP1R3DO95685 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
PPP1R3DO95685 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.05■□□□□ 0.48
PPP1R3DO95685 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.05■□□□□ 0.48
PPP1R3DO95685 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PPP1R3DO95685 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PPP1R3DO95685 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPP1R3DO95685 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PPP1R3DO95685 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPP1R3DO95685 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPP1R3DO95685 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PPP1R3DO95685 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPP1R3DO95685 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPP1R3DO95685 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.04■□□□□ 0.48
PPP1R3DO95685 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PPP1R3DO95685 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPP1R3DO95685 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPP1R3DO95685 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PPP1R3DO95685 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPP1R3DO95685 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPP1R3DO95685 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PPP1R3DO95685 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.04■□□□□ 0.48
PPP1R3DO95685 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PPP1R3DO95685 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.04■□□□□ 0.48
PPP1R3DO95685 AC013268.1-206ENST00000638368 961 ntBASIC18.04■□□□□ 0.48
PPP1R3DO95685 AC112229.1-201ENST00000639295 961 ntBASIC18.04■□□□□ 0.48
PPP1R3DO95685 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPP1R3DO95685 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPP1R3DO95685 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.04■□□□□ 0.48
PPP1R3DO95685 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms