Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC30.29■■■□□ 2.44
RAPGEF3O95398 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC30.29■■■□□ 2.44
RAPGEF3O95398 C1orf229-201ENST00000623686 2258 ntBASIC30.29■■■□□ 2.44
RAPGEF3O95398 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RAPGEF3O95398 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC30.28■■■□□ 2.44
RAPGEF3O95398 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC30.28■■■□□ 2.44
RAPGEF3O95398 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC30.28■■■□□ 2.44
RAPGEF3O95398 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC30.28■■■□□ 2.44
RAPGEF3O95398 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
RAPGEF3O95398 AC004980.1-204ENST00000429707 299 ntBASIC30.28■■■□□ 2.44
RAPGEF3O95398 HCG4P8-203ENST00000443049 980 ntBASIC30.28■■■□□ 2.44
RAPGEF3O95398 AC092647.4-201ENST00000457211 535 ntBASIC30.28■■■□□ 2.44
RAPGEF3O95398 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC30.28■■■□□ 2.44
RAPGEF3O95398 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
RAPGEF3O95398 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RAPGEF3O95398 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RAPGEF3O95398 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
RAPGEF3O95398 MFF-203ENST00000349901 1716 ntTSL 2 BASIC30.27■■■□□ 2.44
RAPGEF3O95398 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RAPGEF3O95398 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
RAPGEF3O95398 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
RAPGEF3O95398 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
RAPGEF3O95398 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
RAPGEF3O95398 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC30.27■■■□□ 2.44
RAPGEF3O95398 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC30.27■■■□□ 2.44
RAPGEF3O95398 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RAPGEF3O95398 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC30.27■■■□□ 2.44
RAPGEF3O95398 AC011558.1-201ENST00000623459 338 ntBASIC30.27■■■□□ 2.44
RAPGEF3O95398 CLN6-214ENST00000636314 442 ntTSL 3 BASIC30.27■■■□□ 2.44
RAPGEF3O95398 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RAPGEF3O95398 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
RAPGEF3O95398 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
RAPGEF3O95398 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
RAPGEF3O95398 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
RAPGEF3O95398 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC30.26■■■□□ 2.43
RAPGEF3O95398 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC30.26■■■□□ 2.43
RAPGEF3O95398 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC30.26■■■□□ 2.43
RAPGEF3O95398 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.43
RAPGEF3O95398 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC30.26■■■□□ 2.43
RAPGEF3O95398 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC30.26■■■□□ 2.43
RAPGEF3O95398 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC30.25■■■□□ 2.43
RAPGEF3O95398 PALM-207ENST00000590161 2137 ntTSL 4 BASIC30.25■■■□□ 2.43
RAPGEF3O95398 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
RAPGEF3O95398 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC30.25■■■□□ 2.43
RAPGEF3O95398 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RAPGEF3O95398 COX11P1-201ENST00000489116 835 ntBASIC30.25■■■□□ 2.43
RAPGEF3O95398 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC30.25■■■□□ 2.43
RAPGEF3O95398 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC30.25■■■□□ 2.43
RAPGEF3O95398 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC30.25■■■□□ 2.43
RAPGEF3O95398 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
RAPGEF3O95398 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RAPGEF3O95398 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
RAPGEF3O95398 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
RAPGEF3O95398 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC30.24■■■□□ 2.43
RAPGEF3O95398 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC30.24■■■□□ 2.43
RAPGEF3O95398 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RAPGEF3O95398 HIST1H2APS4-201ENST00000362070 348 ntBASIC30.24■■■□□ 2.43
RAPGEF3O95398 SLC25A1P4-201ENST00000567977 778 ntBASIC30.24■■■□□ 2.43
RAPGEF3O95398 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC30.24■■■□□ 2.43
RAPGEF3O95398 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC30.24■■■□□ 2.43
RAPGEF3O95398 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RAPGEF3O95398 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC30.24■■■□□ 2.43
RAPGEF3O95398 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC30.24■■■□□ 2.43
RAPGEF3O95398 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RAPGEF3O95398 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RAPGEF3O95398 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC30.24■■■□□ 2.43
RAPGEF3O95398 PTBP1P-201ENST00000554374 1601 ntBASIC30.24■■■□□ 2.43
RAPGEF3O95398 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RAPGEF3O95398 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
RAPGEF3O95398 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC30.23■■■□□ 2.43
RAPGEF3O95398 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RAPGEF3O95398 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
RAPGEF3O95398 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC30.23■■■□□ 2.43
RAPGEF3O95398 AC011484.1-201ENST00000377652 1995 ntBASIC30.23■■■□□ 2.43
RAPGEF3O95398 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
RAPGEF3O95398 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RAPGEF3O95398 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
RAPGEF3O95398 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC30.23■■■□□ 2.43
RAPGEF3O95398 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RAPGEF3O95398 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
RAPGEF3O95398 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
RAPGEF3O95398 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC30.23■■■□□ 2.43
RAPGEF3O95398 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RAPGEF3O95398 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC30.22■■■□□ 2.43
RAPGEF3O95398 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RAPGEF3O95398 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC30.22■■■□□ 2.43
RAPGEF3O95398 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC30.22■■■□□ 2.43
RAPGEF3O95398 AC012313.10-201ENST00000623509 926 ntBASIC30.22■■■□□ 2.43
RAPGEF3O95398 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
RAPGEF3O95398 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC30.22■■■□□ 2.43
RAPGEF3O95398 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RAPGEF3O95398 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
RAPGEF3O95398 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RAPGEF3O95398 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RAPGEF3O95398 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RAPGEF3O95398 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RAPGEF3O95398 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
RAPGEF3O95398 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RAPGEF3O95398 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC30.21■■■□□ 2.43
RAPGEF3O95398 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC30.21■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms