Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPXO76031 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CLPXO76031 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CLPXO76031 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPXO76031 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.13■□□□□ 0.49
CLPXO76031 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPXO76031 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPXO76031 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPXO76031 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.13■□□□□ 0.49
CLPXO76031 AC024257.2-201ENST00000549699 147 ntBASIC18.13■□□□□ 0.49
CLPXO76031 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.13■□□□□ 0.49
CLPXO76031 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.13■□□□□ 0.49
CLPXO76031 AC011298.3-201ENST00000615796 283 ntBASIC18.13■□□□□ 0.49
CLPXO76031 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPXO76031 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPXO76031 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPXO76031 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
CLPXO76031 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.13■□□□□ 0.49
CLPXO76031 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLPXO76031 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPXO76031 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPXO76031 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPXO76031 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CLPXO76031 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 AP000997.3-201ENST00000623333 2250 ntBASIC18.12■□□□□ 0.49
CLPXO76031 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CLPXO76031 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLPXO76031 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.12■□□□□ 0.49
CLPXO76031 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLPXO76031 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.12■□□□□ 0.49
CLPXO76031 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPXO76031 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CLPXO76031 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLPXO76031 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CLPXO76031 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
CLPXO76031 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.11■□□□□ 0.49
CLPXO76031 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.11■□□□□ 0.49
CLPXO76031 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLPXO76031 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.11■□□□□ 0.49
CLPXO76031 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CLPXO76031 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
CLPXO76031 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.11■□□□□ 0.49
CLPXO76031 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.11■□□□□ 0.49
CLPXO76031 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.11■□□□□ 0.49
CLPXO76031 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.11■□□□□ 0.49
CLPXO76031 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 TMEM179-206ENST00000616017 1645 ntBASIC18.11■□□□□ 0.49
CLPXO76031 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CLPXO76031 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPXO76031 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CLPXO76031 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPXO76031 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPXO76031 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPXO76031 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.1■□□□□ 0.49
CLPXO76031 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.1■□□□□ 0.49
CLPXO76031 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLPXO76031 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.1■□□□□ 0.49
CLPXO76031 TREX1-205ENST00000625293 1783 ntBASIC18.1■□□□□ 0.49
CLPXO76031 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPXO76031 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPXO76031 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.1■□□□□ 0.49
CLPXO76031 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.1■□□□□ 0.49
CLPXO76031 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.1■□□□□ 0.49
CLPXO76031 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLPXO76031 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPXO76031 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLPXO76031 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms