Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RPP40O75818 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RPP40O75818 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RPP40O75818 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RPP40O75818 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.58■□□□□ 0.89
RPP40O75818 C2orf69P4-201ENST00000565394 541 ntBASIC20.58■□□□□ 0.89
RPP40O75818 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.58■□□□□ 0.89
RPP40O75818 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RPP40O75818 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPP40O75818 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPP40O75818 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPP40O75818 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPP40O75818 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RPP40O75818 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPP40O75818 FEM1AP1-201ENST00000431297 1995 ntBASIC20.57■□□□□ 0.88
RPP40O75818 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPP40O75818 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPP40O75818 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.57■□□□□ 0.88
RPP40O75818 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.57■□□□□ 0.88
RPP40O75818 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPP40O75818 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPP40O75818 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPP40O75818 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPP40O75818 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.57■□□□□ 0.88
RPP40O75818 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
RPP40O75818 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.57■□□□□ 0.88
RPP40O75818 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.57■□□□□ 0.88
RPP40O75818 AC087499.1-201ENST00000418141 1075 ntBASIC20.57■□□□□ 0.88
RPP40O75818 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.57■□□□□ 0.88
RPP40O75818 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.57■□□□□ 0.88
RPP40O75818 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.57■□□□□ 0.88
RPP40O75818 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.57■□□□□ 0.88
RPP40O75818 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.57■□□□□ 0.88
RPP40O75818 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPP40O75818 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPP40O75818 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPP40O75818 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPP40O75818 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPP40O75818 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPP40O75818 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPP40O75818 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.57■□□□□ 0.88
RPP40O75818 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RPP40O75818 AC027702.1-201ENST00000563810 1770 ntBASIC20.57■□□□□ 0.88
RPP40O75818 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPP40O75818 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPP40O75818 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.56■□□□□ 0.88
RPP40O75818 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RPP40O75818 FP700111.2-201ENST00000619190 1892 ntBASIC20.56■□□□□ 0.88
RPP40O75818 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPP40O75818 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPP40O75818 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.56■□□□□ 0.88
RPP40O75818 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPP40O75818 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPP40O75818 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
RPP40O75818 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPP40O75818 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPP40O75818 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.56■□□□□ 0.88
RPP40O75818 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPP40O75818 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RPP40O75818 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RPP40O75818 AC110285.5-201ENST00000611501 352 ntBASIC20.56■□□□□ 0.88
RPP40O75818 AL157384.1-201ENST00000445995 2473 ntBASIC20.56■□□□□ 0.88
RPP40O75818 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPP40O75818 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPP40O75818 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.56■□□□□ 0.88
RPP40O75818 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPP40O75818 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.56■□□□□ 0.88
RPP40O75818 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPP40O75818 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPP40O75818 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.55■□□□□ 0.88
RPP40O75818 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RPP40O75818 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RPP40O75818 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RPP40O75818 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RPP40O75818 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPP40O75818 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPP40O75818 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RPP40O75818 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.55■□□□□ 0.88
RPP40O75818 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.55■□□□□ 0.88
RPP40O75818 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.55■□□□□ 0.88
RPP40O75818 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RPP40O75818 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.55■□□□□ 0.88
RPP40O75818 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.55■□□□□ 0.88
RPP40O75818 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPP40O75818 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.55■□□□□ 0.88
RPP40O75818 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPP40O75818 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.55■□□□□ 0.88
RPP40O75818 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPP40O75818 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPP40O75818 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.55■□□□□ 0.88
RPP40O75818 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.55■□□□□ 0.88
RPP40O75818 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.54■□□□□ 0.88
RPP40O75818 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RPP40O75818 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPP40O75818 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.54■□□□□ 0.88
RPP40O75818 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.54■□□□□ 0.88
RPP40O75818 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.54■□□□□ 0.88
RPP40O75818 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPP40O75818 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPP40O75818 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms