Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.97■□□□□ 0.47
PFDN1O60925 AC021231.2-201ENST00000594613 730 ntBASIC17.97■□□□□ 0.47
PFDN1O60925 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PFDN1O60925 AL356309.3-201ENST00000624132 1934 ntBASIC17.97■□□□□ 0.47
PFDN1O60925 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PFDN1O60925 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.97■□□□□ 0.47
PFDN1O60925 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.97■□□□□ 0.47
PFDN1O60925 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PFDN1O60925 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.97■□□□□ 0.47
PFDN1O60925 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.97■□□□□ 0.47
PFDN1O60925 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.97■□□□□ 0.47
PFDN1O60925 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.97■□□□□ 0.47
PFDN1O60925 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PFDN1O60925 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PFDN1O60925 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PFDN1O60925 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PFDN1O60925 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PFDN1O60925 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PFDN1O60925 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PFDN1O60925 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PFDN1O60925 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.96■□□□□ 0.47
PFDN1O60925 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PFDN1O60925 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.96■□□□□ 0.47
PFDN1O60925 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PFDN1O60925 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PFDN1O60925 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.96■□□□□ 0.47
PFDN1O60925 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PFDN1O60925 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PFDN1O60925 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PFDN1O60925 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PFDN1O60925 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PFDN1O60925 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PFDN1O60925 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.96■□□□□ 0.47
PFDN1O60925 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.96■□□□□ 0.47
PFDN1O60925 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PFDN1O60925 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PFDN1O60925 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PFDN1O60925 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PFDN1O60925 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.95■□□□□ 0.46
PFDN1O60925 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.95■□□□□ 0.46
PFDN1O60925 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.95■□□□□ 0.46
PFDN1O60925 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.95■□□□□ 0.46
PFDN1O60925 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PFDN1O60925 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.95■□□□□ 0.46
PFDN1O60925 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.95■□□□□ 0.46
PFDN1O60925 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PFDN1O60925 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PFDN1O60925 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PFDN1O60925 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PFDN1O60925 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PFDN1O60925 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PFDN1O60925 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PFDN1O60925 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
PFDN1O60925 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PFDN1O60925 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
PFDN1O60925 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PFDN1O60925 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PFDN1O60925 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PFDN1O60925 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PFDN1O60925 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PFDN1O60925 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PFDN1O60925 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PFDN1O60925 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.94■□□□□ 0.46
PFDN1O60925 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.94■□□□□ 0.46
PFDN1O60925 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.94■□□□□ 0.46
PFDN1O60925 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.94■□□□□ 0.46
PFDN1O60925 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PFDN1O60925 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.94■□□□□ 0.46
PFDN1O60925 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PFDN1O60925 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PFDN1O60925 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PFDN1O60925 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.94■□□□□ 0.46
PFDN1O60925 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PFDN1O60925 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PFDN1O60925 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PFDN1O60925 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PFDN1O60925 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.93■□□□□ 0.46
PFDN1O60925 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PFDN1O60925 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.93■□□□□ 0.46
PFDN1O60925 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PFDN1O60925 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PFDN1O60925 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PFDN1O60925 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms