Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HCN1O60741 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HCN1O60741 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
HCN1O60741 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.66■□□□□ 0.58
HCN1O60741 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCN1O60741 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.66■□□□□ 0.58
HCN1O60741 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCN1O60741 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HCN1O60741 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HCN1O60741 MCRIP2P1-201ENST00000394346 511 ntBASIC18.66■□□□□ 0.58
HCN1O60741 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCN1O60741 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
HCN1O60741 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.66■□□□□ 0.58
HCN1O60741 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.66■□□□□ 0.58
HCN1O60741 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.66■□□□□ 0.58
HCN1O60741 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HCN1O60741 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCN1O60741 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCN1O60741 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCN1O60741 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.65■□□□□ 0.58
HCN1O60741 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.65■□□□□ 0.58
HCN1O60741 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HCN1O60741 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HCN1O60741 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCN1O60741 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCN1O60741 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCN1O60741 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCN1O60741 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.65■□□□□ 0.58
HCN1O60741 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCN1O60741 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCN1O60741 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.65■□□□□ 0.58
HCN1O60741 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCN1O60741 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.65■□□□□ 0.58
HCN1O60741 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCN1O60741 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCN1O60741 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.65■□□□□ 0.58
HCN1O60741 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.65■□□□□ 0.58
HCN1O60741 DUSP5P2-201ENST00000426873 1033 ntBASIC18.65■□□□□ 0.58
HCN1O60741 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.65■□□□□ 0.58
HCN1O60741 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.65■□□□□ 0.58
HCN1O60741 FAM201B-201ENST00000458407 597 ntBASIC18.65■□□□□ 0.58
HCN1O60741 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.65■□□□□ 0.58
HCN1O60741 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.65■□□□□ 0.58
HCN1O60741 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HCN1O60741 AC083880.1-201ENST00000608266 535 ntBASIC18.65■□□□□ 0.58
HCN1O60741 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HCN1O60741 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HCN1O60741 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCN1O60741 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCN1O60741 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.65■□□□□ 0.58
HCN1O60741 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCN1O60741 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCN1O60741 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HCN1O60741 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.65■□□□□ 0.58
HCN1O60741 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.65■□□□□ 0.58
HCN1O60741 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HCN1O60741 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.64■□□□□ 0.58
HCN1O60741 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
HCN1O60741 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
HCN1O60741 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCN1O60741 AC138932.1-201ENST00000534164 6830 ntBASIC18.64■□□□□ 0.57
HCN1O60741 AC116050.2-201ENST00000612102 1779 ntBASIC18.64■□□□□ 0.57
HCN1O60741 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN1O60741 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN1O60741 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.64■□□□□ 0.57
HCN1O60741 RNA5SP413-201ENST00000516373 109 ntBASIC18.64■□□□□ 0.57
HCN1O60741 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.64■□□□□ 0.57
HCN1O60741 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.64■□□□□ 0.57
HCN1O60741 AL589743.5-201ENST00000616611 1050 ntBASIC18.64■□□□□ 0.57
HCN1O60741 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN1O60741 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN1O60741 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN1O60741 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HCN1O60741 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCN1O60741 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HCN1O60741 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.64■□□□□ 0.57
HCN1O60741 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN1O60741 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN1O60741 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.64■□□□□ 0.57
HCN1O60741 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.63■□□□□ 0.57
HCN1O60741 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.63■□□□□ 0.57
HCN1O60741 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HCN1O60741 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.63■□□□□ 0.57
HCN1O60741 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.63■□□□□ 0.57
HCN1O60741 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HCN1O60741 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.63■□□□□ 0.57
HCN1O60741 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.63■□□□□ 0.57
HCN1O60741 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.63■□□□□ 0.57
HCN1O60741 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.63■□□□□ 0.57
HCN1O60741 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms