Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.85■□□□□ 0.61
PLOD3O60568 NCF1B-203ENST00000435988 1254 ntBASIC18.85■□□□□ 0.61
PLOD3O60568 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PLOD3O60568 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.85■□□□□ 0.61
PLOD3O60568 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.85■□□□□ 0.61
PLOD3O60568 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.85■□□□□ 0.61
PLOD3O60568 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.85■□□□□ 0.61
PLOD3O60568 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PLOD3O60568 DPP3P2-201ENST00000416030 1696 ntBASIC18.85■□□□□ 0.61
PLOD3O60568 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.85■□□□□ 0.61
PLOD3O60568 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PLOD3O60568 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PLOD3O60568 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PLOD3O60568 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PLOD3O60568 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PLOD3O60568 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PLOD3O60568 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PLOD3O60568 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PLOD3O60568 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PLOD3O60568 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.84■□□□□ 0.61
PLOD3O60568 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PLOD3O60568 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PLOD3O60568 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PLOD3O60568 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PLOD3O60568 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PLOD3O60568 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PLOD3O60568 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PLOD3O60568 SMG8-203ENST00000578922 2178 ntBASIC18.83■□□□□ 0.61
PLOD3O60568 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PLOD3O60568 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PLOD3O60568 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PLOD3O60568 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PLOD3O60568 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
PLOD3O60568 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PLOD3O60568 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PLOD3O60568 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PLOD3O60568 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PLOD3O60568 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PLOD3O60568 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.83■□□□□ 0.6
PLOD3O60568 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PLOD3O60568 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PLOD3O60568 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.83■□□□□ 0.6
PLOD3O60568 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.83■□□□□ 0.6
PLOD3O60568 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PLOD3O60568 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PLOD3O60568 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PLOD3O60568 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PLOD3O60568 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.83■□□□□ 0.6
PLOD3O60568 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PLOD3O60568 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PLOD3O60568 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PLOD3O60568 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PLOD3O60568 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PLOD3O60568 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.82■□□□□ 0.6
PLOD3O60568 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PLOD3O60568 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.82■□□□□ 0.6
PLOD3O60568 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.82■□□□□ 0.6
PLOD3O60568 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.82■□□□□ 0.6
PLOD3O60568 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PLOD3O60568 LSM12P1-201ENST00000411836 588 ntBASIC18.82■□□□□ 0.6
PLOD3O60568 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.82■□□□□ 0.6
PLOD3O60568 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.82■□□□□ 0.6
PLOD3O60568 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.82■□□□□ 0.6
PLOD3O60568 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.82■□□□□ 0.6
PLOD3O60568 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.82■□□□□ 0.6
PLOD3O60568 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.82■□□□□ 0.6
PLOD3O60568 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PLOD3O60568 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PLOD3O60568 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PLOD3O60568 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PLOD3O60568 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.81■□□□□ 0.6
PLOD3O60568 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.81■□□□□ 0.6
PLOD3O60568 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PLOD3O60568 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PLOD3O60568 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.81■□□□□ 0.6
PLOD3O60568 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PLOD3O60568 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PLOD3O60568 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.81■□□□□ 0.6
PLOD3O60568 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PLOD3O60568 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PLOD3O60568 GPX1P1-201ENST00000388829 606 ntBASIC18.81■□□□□ 0.6
PLOD3O60568 BX276092.2-201ENST00000417668 665 ntBASIC18.81■□□□□ 0.6
PLOD3O60568 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.81■□□□□ 0.6
PLOD3O60568 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PLOD3O60568 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.81■□□□□ 0.6
PLOD3O60568 C2orf69P4-201ENST00000565394 541 ntBASIC18.81■□□□□ 0.6
PLOD3O60568 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.81■□□□□ 0.6
PLOD3O60568 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.81■□□□□ 0.6
PLOD3O60568 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.81■□□□□ 0.6
PLOD3O60568 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PLOD3O60568 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
PLOD3O60568 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PLOD3O60568 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PLOD3O60568 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.81■□□□□ 0.6
PLOD3O60568 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PLOD3O60568 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PLOD3O60568 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.81■□□□□ 0.6
PLOD3O60568 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.8■□□□□ 0.6
PLOD3O60568 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PLOD3O60568 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms