Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCMT2O60294 AC092368.3-202ENST00000574180 1591 ntBASIC19.18■□□□□ 0.66
LCMT2O60294 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.18■□□□□ 0.66
LCMT2O60294 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCMT2O60294 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LCMT2O60294 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCMT2O60294 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LCMT2O60294 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCMT2O60294 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.17■□□□□ 0.66
LCMT2O60294 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.17■□□□□ 0.66
LCMT2O60294 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.17■□□□□ 0.66
LCMT2O60294 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LCMT2O60294 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCMT2O60294 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCMT2O60294 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.17■□□□□ 0.66
LCMT2O60294 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCMT2O60294 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LCMT2O60294 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.17■□□□□ 0.66
LCMT2O60294 PNMA6B-201ENST00000538162 1200 ntBASIC19.17■□□□□ 0.66
LCMT2O60294 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.17■□□□□ 0.66
LCMT2O60294 AC005829.2-201ENST00000571422 1056 ntBASIC19.17■□□□□ 0.66
LCMT2O60294 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCMT2O60294 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LCMT2O60294 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCMT2O60294 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
LCMT2O60294 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.17■□□□□ 0.66
LCMT2O60294 BX119927.1-201ENST00000636596 1552 ntBASIC19.17■□□□□ 0.66
LCMT2O60294 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCMT2O60294 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LCMT2O60294 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LCMT2O60294 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LCMT2O60294 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LCMT2O60294 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCMT2O60294 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCMT2O60294 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LCMT2O60294 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LCMT2O60294 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCMT2O60294 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCMT2O60294 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCMT2O60294 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCMT2O60294 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.16■□□□□ 0.66
LCMT2O60294 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.16■□□□□ 0.66
LCMT2O60294 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.16■□□□□ 0.66
LCMT2O60294 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.16■□□□□ 0.66
LCMT2O60294 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.16■□□□□ 0.66
LCMT2O60294 AC006557.6-201ENST00000623071 864 ntBASIC19.16■□□□□ 0.66
LCMT2O60294 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCMT2O60294 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCMT2O60294 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.16■□□□□ 0.66
LCMT2O60294 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LCMT2O60294 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCMT2O60294 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCMT2O60294 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCMT2O60294 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCMT2O60294 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCMT2O60294 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
LCMT2O60294 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
LCMT2O60294 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCMT2O60294 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCMT2O60294 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.15■□□□□ 0.66
LCMT2O60294 PCDHAC2-203ENST00000615316 3011 ntBASIC19.15■□□□□ 0.66
LCMT2O60294 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCMT2O60294 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCMT2O60294 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCMT2O60294 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LCMT2O60294 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCMT2O60294 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.15■□□□□ 0.66
LCMT2O60294 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCMT2O60294 RNA5SP413-201ENST00000516373 109 ntBASIC19.15■□□□□ 0.66
LCMT2O60294 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LCMT2O60294 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCMT2O60294 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LCMT2O60294 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.15■□□□□ 0.66
LCMT2O60294 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.15■□□□□ 0.66
LCMT2O60294 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.15■□□□□ 0.66
LCMT2O60294 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCMT2O60294 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.15■□□□□ 0.66
LCMT2O60294 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.14■□□□□ 0.66
LCMT2O60294 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.14■□□□□ 0.66
LCMT2O60294 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
LCMT2O60294 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.14■□□□□ 0.66
LCMT2O60294 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LCMT2O60294 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.14■□□□□ 0.66
LCMT2O60294 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
LCMT2O60294 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LCMT2O60294 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.14■□□□□ 0.65
LCMT2O60294 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCMT2O60294 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.14■□□□□ 0.65
LCMT2O60294 HLA-G-202ENST00000376815 851 ntBASIC19.14■□□□□ 0.65
LCMT2O60294 HLA-G-203ENST00000376818 1127 ntBASIC19.14■□□□□ 0.65
LCMT2O60294 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCMT2O60294 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.14■□□□□ 0.65
LCMT2O60294 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
LCMT2O60294 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.14■□□□□ 0.65
LCMT2O60294 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.14■□□□□ 0.65
LCMT2O60294 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.14■□□□□ 0.65
LCMT2O60294 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LCMT2O60294 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCMT2O60294 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCMT2O60294 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms