Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.771e-6■□□□□ 10.7
NKRFO15226 ARRDC1-205ENST00000466367 866 ntTSL 1 (best)24.77■■□□□ 1.561e-6■□□□□ 10.7
NKRFO15226 ARRDC1-202ENST00000419386 829 ntTSL 324.59■■□□□ 1.531e-6■□□□□ 10.7
NKRFO15226 ARRDC1-204ENST00000461627 882 ntTSL 224.2■■□□□ 1.461e-6■□□□□ 10.7
NKRFO15226 ARRDC1-207ENST00000471125 612 ntTSL 324.2■■□□□ 1.461e-6■□□□□ 10.7
NKRFO15226 ARRDC1-211ENST00000495220 747 ntTSL 223.02■■□□□ 1.281e-6■□□□□ 10.7
NKRFO15226 ARRDC1-203ENST00000431925 555 ntTSL 321.09■□□□□ 0.971e-6■□□□□ 10.7
NKRFO15226 ARRDC1-209ENST00000483563 704 ntTSL 321.04■□□□□ 0.961e-6■□□□□ 10.7
NKRFO15226 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.51■□□□□ 0.555e-7■□□□□ 10.7
NKRFO15226 CAPN15-205ENST00000567216 3174 ntTSL 1 (best)22.29■■□□□ 1.162e-6■□□□□ 10.7
NKRFO15226 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.53■■□□□ 1.529e-11■□□□□ 10.7
NKRFO15226 MBNL3-208ENST00000436215 891 ntTSL 36.65□□□□□ -1.349e-11■□□□□ 10.7
NKRFO15226 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.262e-6■□□□□ 10.6
NKRFO15226 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.589e-15■□□□□ 10.6
NKRFO15226 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.439e-15■□□□□ 10.6
NKRFO15226 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 02e-9■□□□□ 10.6
NKRFO15226 SLC38A2-210ENST00000551405 526 ntTSL 419.46■□□□□ 0.713e-7■□□□□ 10.6
NKRFO15226 SLC38A2-213ENST00000553252 846 ntTSL 219.3■□□□□ 0.683e-7■□□□□ 10.6
NKRFO15226 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.448e-11■□□□□ 10.6
NKRFO15226 LONRF1-207ENST00000530693 508 ntTSL 416.64■□□□□ 0.258e-11■□□□□ 10.6
NKRFO15226 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.651e-6■□□□□ 10.6
NKRFO15226 GOLGA3-207ENST00000545875 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.451e-6■□□□□ 10.6
NKRFO15226 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.551e-6■□□□□ 10.6
NKRFO15226 KANSL1-225ENST00000639356 1717 ntTSL 519.99■□□□□ 0.793e-6■□□□□ 10.6
NKRFO15226 KANSL1-209ENST00000574655 1681 ntTSL 518.02■□□□□ 0.473e-6■□□□□ 10.6
NKRFO15226 KANSL1-222ENST00000639099 1724 ntTSL 517.5■□□□□ 0.393e-6■□□□□ 10.6
NKRFO15226 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC12.43□□□□□ -0.423e-6■□□□□ 10.6
NKRFO15226 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.513e-6■□□□□ 10.6
NKRFO15226 KANSL1-217ENST00000638269 3365 ntTSL 511.21□□□□□ -0.613e-6■□□□□ 10.6
NKRFO15226 KANSL1-226ENST00000639375 3392 ntTSL 58.56□□□□□ -1.043e-6■□□□□ 10.6
NKRFO15226 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.723e-7■□□□□ 10.6
NKRFO15226 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.463e-7■□□□□ 10.6
NKRFO15226 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.063e-7■□□□□ 10.6
NKRFO15226 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.943e-7■□□□□ 10.6
NKRFO15226 PCSK6-203ENST00000557794 1196 ntTSL 512.81□□□□□ -0.363e-7■□□□□ 10.6
NKRFO15226 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.871e-6■□□□□ 10.6
NKRFO15226 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.521e-7■□□□□ 10.6
NKRFO15226 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.951e-7■□□□□ 10.6
NKRFO15226 ZNF652-203ENST00000508237 4543 ntTSL 214.71□□□□□ -0.051e-7■□□□□ 10.6
NKRFO15226 RNASET2-209ENST00000499370 2164 ntTSL 212.23□□□□□ -0.451e-7■□□□□ 10.6
NKRFO15226 THOC5-206ENST00000418021 738 ntTSL 312.1□□□□□ -0.471e-7■□□□□ 10.6
NKRFO15226 RNASET2-208ENST00000496851 881 ntTSL 511.09□□□□□ -0.631e-7■□□□□ 10.6
NKRFO15226 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.251e-7■□□□□ 10.6
NKRFO15226 ARRDC1-210ENST00000491911 3185 ntTSL 215.85■□□□□ 0.139e-7■□□□□ 10.6
NKRFO15226 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.94■■■□□ 2.062e-6■□□□□ 10.6
NKRFO15226 PROC-208ENST00000442644 600 ntTSL 323■■□□□ 1.272e-6■□□□□ 10.6
NKRFO15226 PROC-202ENST00000402125 779 ntTSL 220.93■□□□□ 0.942e-6■□□□□ 10.6
NKRFO15226 PROC-209ENST00000464089 563 ntTSL 420.61■□□□□ 0.892e-6■□□□□ 10.6
NKRFO15226 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.642e-6■□□□□ 10.6
NKRFO15226 RIPOR1-218ENST00000566920 584 ntTSL 420.43■□□□□ 0.863e-6■□□□□ 10.6
NKRFO15226 RIPOR1-208ENST00000562755 538 ntTSL 419.56■□□□□ 0.723e-6■□□□□ 10.6
NKRFO15226 RIPOR1-207ENST00000562116 244 ntTSL 318.9■□□□□ 0.623e-6■□□□□ 10.6
NKRFO15226 RIPOR1-213ENST00000566522 592 ntTSL 517.73■□□□□ 0.433e-6■□□□□ 10.6
NKRFO15226 RIPOR1-217ENST00000566907 634 ntTSL 414.69□□□□□ -0.063e-6■□□□□ 10.6
NKRFO15226 RIPOR1-202ENST00000379312 4116 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.323e-6■□□□□ 10.6
NKRFO15226 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.393e-6■□□□□ 10.6
NKRFO15226 RIPOR1-201ENST00000042381 4051 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.433e-6■□□□□ 10.6
NKRFO15226 RIPOR1-203ENST00000422602 3990 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.453e-6■□□□□ 10.6
NKRFO15226 BCAM-209ENST00000590624 991 ntTSL 1 (best)23.03■■□□□ 1.282e-31■□□□□ 10.6
NKRFO15226 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.182e-31■□□□□ 10.6
NKRFO15226 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC14.48□□□□□ -0.092e-31■□□□□ 10.6
NKRFO15226 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.58e-7■□□□□ 10.6
NKRFO15226 ETS2-203ENST00000432278 1033 ntTSL 522.41■■□□□ 1.183e-11■□□□□ 10.6
NKRFO15226 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.123e-11■□□□□ 10.6
NKRFO15226 ETS2-202ENST00000360938 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.33e-11■□□□□ 10.6
NKRFO15226 NSMF-207ENST00000371482 2888 ntTSL 1 (best)18.22■□□□□ 0.513e-6■□□□□ 10.6
NKRFO15226 RHBG-208ENST00000620376 1984 ntTSL 224.27■■□□□ 1.482e-7■□□□□ 10.6
NKRFO15226 RHBG-201ENST00000451864 1927 ntTSL 223.52■■□□□ 1.362e-7■□□□□ 10.6
NKRFO15226 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.62e-7■□□□□ 10.6
NKRFO15226 RHBG-205ENST00000612897 1862 ntTSL 1 (best)18.68■□□□□ 0.582e-7■□□□□ 10.6
NKRFO15226 RHBG-206ENST00000613460 1912 ntTSL 1 (best)15.83■□□□□ 0.122e-7■□□□□ 10.6
NKRFO15226 RHBG-207ENST00000618120 2424 ntTSL 215.15■□□□□ 0.022e-7■□□□□ 10.6
NKRFO15226 LPIN2-203ENST00000584294 936 ntTSL 320.88■□□□□ 0.934e-8■□□□□ 10.6
NKRFO15226 TNRC18-206ENST00000434361 577 ntTSL 318.55■□□□□ 0.562e-8■□□□□ 10.6
NKRFO15226 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.054e-7■□□□□ 10.6
NKRFO15226 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)31.88■■■□□ 2.691e-7■□□□□ 10.5
NKRFO15226 VEGFA-217ENST00000518538 535 ntTSL 225.24■■□□□ 1.631e-7■□□□□ 10.5
NKRFO15226 VEGFA-216ENST00000512683 475 ntTSL 1 (best)14.81□□□□□ -0.041e-7■□□□□ 10.5
NKRFO15226 CORO1C-216ENST00000551059 474 ntTSL 221.57■■□□□ 1.042e-9■□□□□ 10.5
NKRFO15226 CORO1C-214ENST00000550542 1245 ntTSL 521.21■□□□□ 0.992e-9■□□□□ 10.5
NKRFO15226 CORO1C-219ENST00000552871 587 ntTSL 321.21■□□□□ 0.992e-9■□□□□ 10.5
NKRFO15226 CORO1C-210ENST00000549384 891 ntTSL 520.87■□□□□ 0.932e-9■□□□□ 10.5
NKRFO15226 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.852e-9■□□□□ 10.5
NKRFO15226 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.832e-9■□□□□ 10.5
NKRFO15226 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.99■□□□□ 0.472e-9■□□□□ 10.5
NKRFO15226 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.382e-9■□□□□ 10.5
NKRFO15226 FAM129B-204ENST00000468379 828 ntTSL 316.8■□□□□ 0.282e-9■□□□□ 10.5
NKRFO15226 SMYD3-207ENST00000462422 971 ntTSL 514.88□□□□□ -0.032e-9■□□□□ 10.5
NKRFO15226 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.162e-9■□□□□ 10.5
NKRFO15226 CORO1C-201ENST00000261401 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.312e-9■□□□□ 10.5
NKRFO15226 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC11.92□□□□□ -0.52e-9■□□□□ 10.5
NKRFO15226 CORO1C-217ENST00000551550 547 ntTSL 411.01□□□□□ -0.652e-9■□□□□ 10.5
NKRFO15226 TRAF3-209ENST00000560463 701 ntTSL 39.58□□□□□ -0.882e-9■□□□□ 10.5
NKRFO15226 SMYD3-216ENST00000492487 634 ntTSL 39.43□□□□□ -0.92e-9■□□□□ 10.5
NKRFO15226 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC9.04□□□□□ -0.962e-9■□□□□ 10.5
NKRFO15226 SMYD3-205ENST00000453676 562 ntTSL 45.32□□□□□ -1.562e-9■□□□□ 10.5
NKRFO15226 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.662e-11■□□□□ 10.5
NKRFO15226 CDK8-205ENST00000536792 3032 ntTSL 1 (best)17.85■□□□□ 0.452e-11■□□□□ 10.5
NKRFO15226 SOS1-204ENST00000451331 579 ntTSL 418.87■□□□□ 0.614e-11■□□□□ 10.5
NKRFO15226 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.76□□□□□ -1.654e-11■□□□□ 10.5
Retrieved 100 of 9,198 protein–RNA pairs in 77.4 ms