Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CAPN9O14815 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CAPN9O14815 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN9O14815 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.11■□□□□ 0.97
CAPN9O14815 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN9O14815 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN9O14815 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.11■□□□□ 0.97
CAPN9O14815 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CAPN9O14815 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CAPN9O14815 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN9O14815 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN9O14815 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN9O14815 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN9O14815 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN9O14815 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CAPN9O14815 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN9O14815 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN9O14815 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN9O14815 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.1■□□□□ 0.97
CAPN9O14815 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN9O14815 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN9O14815 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.1■□□□□ 0.97
CAPN9O14815 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.1■□□□□ 0.97
CAPN9O14815 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CAPN9O14815 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.1■□□□□ 0.97
CAPN9O14815 AC066615.1-201ENST00000640911 628 ntBASIC21.1■□□□□ 0.97
CAPN9O14815 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CAPN9O14815 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN9O14815 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN9O14815 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.1■□□□□ 0.97
CAPN9O14815 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CAPN9O14815 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN9O14815 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN9O14815 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN9O14815 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN9O14815 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN9O14815 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN9O14815 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN9O14815 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN9O14815 AP005212.1-201ENST00000581547 1997 ntBASIC21.09■□□□□ 0.97
CAPN9O14815 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CAPN9O14815 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN9O14815 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.09■□□□□ 0.97
CAPN9O14815 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN9O14815 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.09■□□□□ 0.97
CAPN9O14815 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CAPN9O14815 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN9O14815 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.09■□□□□ 0.97
CAPN9O14815 LINC01521-201ENST00000504184 1943 ntBASIC21.09■□□□□ 0.97
CAPN9O14815 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
CAPN9O14815 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN9O14815 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN9O14815 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN9O14815 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.08■□□□□ 0.97
CAPN9O14815 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN9O14815 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN9O14815 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CAPN9O14815 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CAPN9O14815 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CAPN9O14815 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CAPN9O14815 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN9O14815 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.08■□□□□ 0.97
CAPN9O14815 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN9O14815 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CAPN9O14815 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.08■□□□□ 0.96
CAPN9O14815 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CAPN9O14815 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CAPN9O14815 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CAPN9O14815 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CAPN9O14815 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.07■□□□□ 0.96
CAPN9O14815 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.07■□□□□ 0.96
CAPN9O14815 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.07■□□□□ 0.96
CAPN9O14815 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 KRT18P6-201ENST00000555540 1265 ntBASIC21.07■□□□□ 0.96
CAPN9O14815 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.07■□□□□ 0.96
CAPN9O14815 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.07■□□□□ 0.96
CAPN9O14815 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.07■□□□□ 0.96
CAPN9O14815 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN9O14815 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.06■□□□□ 0.96
CAPN9O14815 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN9O14815 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN9O14815 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN9O14815 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CAPN9O14815 RNA5SP413-201ENST00000516373 109 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms