Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KPNA4O00629 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KPNA4O00629 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KPNA4O00629 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.67■□□□□ 0.58
KPNA4O00629 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.67■□□□□ 0.58
KPNA4O00629 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.67■□□□□ 0.58
KPNA4O00629 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KPNA4O00629 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.67■□□□□ 0.58
KPNA4O00629 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KPNA4O00629 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
KPNA4O00629 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KPNA4O00629 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KPNA4O00629 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KPNA4O00629 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KPNA4O00629 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KPNA4O00629 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.66■□□□□ 0.58
KPNA4O00629 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.66■□□□□ 0.58
KPNA4O00629 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.66■□□□□ 0.58
KPNA4O00629 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
KPNA4O00629 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.66■□□□□ 0.58
KPNA4O00629 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KPNA4O00629 AC116562.4-201ENST00000641316 2276 ntBASIC18.66■□□□□ 0.58
KPNA4O00629 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.66■□□□□ 0.58
KPNA4O00629 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KPNA4O00629 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
KPNA4O00629 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
KPNA4O00629 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.65■□□□□ 0.58
KPNA4O00629 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KPNA4O00629 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.65■□□□□ 0.58
KPNA4O00629 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KPNA4O00629 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KPNA4O00629 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.65■□□□□ 0.58
KPNA4O00629 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.65■□□□□ 0.58
KPNA4O00629 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.65■□□□□ 0.58
KPNA4O00629 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.65■□□□□ 0.58
KPNA4O00629 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.65■□□□□ 0.58
KPNA4O00629 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.65■□□□□ 0.58
KPNA4O00629 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.65■□□□□ 0.58
KPNA4O00629 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.65■□□□□ 0.58
KPNA4O00629 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KPNA4O00629 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KPNA4O00629 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
KPNA4O00629 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KPNA4O00629 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
KPNA4O00629 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KPNA4O00629 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KPNA4O00629 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.64■□□□□ 0.58
KPNA4O00629 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.64■□□□□ 0.58
KPNA4O00629 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
KPNA4O00629 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.64■□□□□ 0.57
KPNA4O00629 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KPNA4O00629 AC116050.2-201ENST00000612102 1779 ntBASIC18.64■□□□□ 0.57
KPNA4O00629 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.64■□□□□ 0.57
KPNA4O00629 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KPNA4O00629 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KPNA4O00629 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.64■□□□□ 0.57
KPNA4O00629 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KPNA4O00629 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.64■□□□□ 0.57
KPNA4O00629 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KPNA4O00629 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.64■□□□□ 0.57
KPNA4O00629 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KPNA4O00629 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KPNA4O00629 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KPNA4O00629 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KPNA4O00629 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.64■□□□□ 0.57
KPNA4O00629 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.64■□□□□ 0.57
KPNA4O00629 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KPNA4O00629 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KPNA4O00629 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KPNA4O00629 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KPNA4O00629 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KPNA4O00629 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KPNA4O00629 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KPNA4O00629 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
KPNA4O00629 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KPNA4O00629 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KPNA4O00629 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KPNA4O00629 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KPNA4O00629 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KPNA4O00629 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KPNA4O00629 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KPNA4O00629 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
KPNA4O00629 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KPNA4O00629 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KPNA4O00629 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KPNA4O00629 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms