Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC016405.3-201ENST00000607710 860 ntBASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 MIR6821-201ENST00000617625 74 ntBASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 AC125437.2-201ENST00000625180 2167 ntBASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 BX119927.1-201ENST00000636596 1552 ntBASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 AC013268.1-206ENST00000638368 961 ntBASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 AC112229.1-201ENST00000639295 961 ntBASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF4LA6NMK7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CPSF4LA6NMK7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF4LA6NMK7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.45■□□□□ 0.54
CPSF4LA6NMK7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF4LA6NMK7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF4LA6NMK7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF4LA6NMK7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF4LA6NMK7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF4LA6NMK7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CPSF4LA6NMK7 KRT18P11-201ENST00000435214 1283 ntBASIC18.45■□□□□ 0.54
CPSF4LA6NMK7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.45■□□□□ 0.54
CPSF4LA6NMK7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CPSF4LA6NMK7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF4LA6NMK7 AL158211.5-201ENST00000623583 2518 ntBASIC18.45■□□□□ 0.54
CPSF4LA6NMK7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF4LA6NMK7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 KRT18P5-201ENST00000436075 1291 ntBASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF4LA6NMK7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 AC016769.1-201ENST00000409132 1010 ntBASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CPSF4LA6NMK7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms