Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTL1A6NKG5 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.75■■□□□ 1.87
RTL1A6NKG5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTL1A6NKG5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTL1A6NKG5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC26.75■■□□□ 1.87
RTL1A6NKG5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTL1A6NKG5 PLK5-205ENST00000642079 1969 ntBASIC26.75■■□□□ 1.87
RTL1A6NKG5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
RTL1A6NKG5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTL1A6NKG5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTL1A6NKG5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
RTL1A6NKG5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC26.74■■□□□ 1.87
RTL1A6NKG5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC26.74■■□□□ 1.87
RTL1A6NKG5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC26.74■■□□□ 1.87
RTL1A6NKG5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC26.74■■□□□ 1.87
RTL1A6NKG5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC26.74■■□□□ 1.87
RTL1A6NKG5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
RTL1A6NKG5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.74■■□□□ 1.87
RTL1A6NKG5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTL1A6NKG5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC26.74■■□□□ 1.87
RTL1A6NKG5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
RTL1A6NKG5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC26.74■■□□□ 1.87
RTL1A6NKG5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTL1A6NKG5 RCN1P1-201ENST00000400413 996 ntBASIC26.73■■□□□ 1.87
RTL1A6NKG5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTL1A6NKG5 RBM17P1-201ENST00000453646 1190 ntBASIC26.73■■□□□ 1.87
RTL1A6NKG5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTL1A6NKG5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC26.73■■□□□ 1.87
RTL1A6NKG5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTL1A6NKG5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTL1A6NKG5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
RTL1A6NKG5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RTL1A6NKG5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
RTL1A6NKG5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC26.73■■□□□ 1.87
RTL1A6NKG5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTL1A6NKG5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTL1A6NKG5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTL1A6NKG5 AP002982.1-201ENST00000492365 877 ntBASIC26.72■■□□□ 1.87
RTL1A6NKG5 AC010331.1-201ENST00000611423 582 ntBASIC26.72■■□□□ 1.87
RTL1A6NKG5 REXO1L10P-201ENST00000615707 1290 ntBASIC26.72■■□□□ 1.87
RTL1A6NKG5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC26.72■■□□□ 1.87
RTL1A6NKG5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTL1A6NKG5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC26.72■■□□□ 1.87
RTL1A6NKG5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTL1A6NKG5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTL1A6NKG5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RTL1A6NKG5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.72■■□□□ 1.87
RTL1A6NKG5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTL1A6NKG5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTL1A6NKG5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC26.72■■□□□ 1.87
RTL1A6NKG5 KRT8P17-201ENST00000453110 1448 ntBASIC26.72■■□□□ 1.87
RTL1A6NKG5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC26.72■■□□□ 1.87
RTL1A6NKG5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTL1A6NKG5 MIR1224-201ENST00000408193 85 ntBASIC26.71■■□□□ 1.87
RTL1A6NKG5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTL1A6NKG5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTL1A6NKG5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTL1A6NKG5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTL1A6NKG5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC26.71■■□□□ 1.87
RTL1A6NKG5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTL1A6NKG5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTL1A6NKG5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC26.71■■□□□ 1.87
RTL1A6NKG5 KRT18P21-201ENST00000515767 1272 ntBASIC26.71■■□□□ 1.87
RTL1A6NKG5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC26.71■■□□□ 1.87
RTL1A6NKG5 C1QL1P1-201ENST00000568105 661 ntBASIC26.71■■□□□ 1.87
RTL1A6NKG5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
RTL1A6NKG5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
RTL1A6NKG5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.7■■□□□ 1.87
RTL1A6NKG5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
RTL1A6NKG5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC26.7■■□□□ 1.87
RTL1A6NKG5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
RTL1A6NKG5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC26.7■■□□□ 1.86
RTL1A6NKG5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC26.7■■□□□ 1.86
RTL1A6NKG5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RTL1A6NKG5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RTL1A6NKG5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RTL1A6NKG5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC26.7■■□□□ 1.86
RTL1A6NKG5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC26.7■■□□□ 1.86
RTL1A6NKG5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC26.7■■□□□ 1.86
RTL1A6NKG5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC26.7■■□□□ 1.86
RTL1A6NKG5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RTL1A6NKG5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC26.69■■□□□ 1.86
RTL1A6NKG5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
RTL1A6NKG5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RTL1A6NKG5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RTL1A6NKG5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RTL1A6NKG5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
RTL1A6NKG5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RTL1A6NKG5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC26.69■■□□□ 1.86
RTL1A6NKG5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
RTL1A6NKG5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RTL1A6NKG5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC26.69■■□□□ 1.86
RTL1A6NKG5 KSR1P1-201ENST00000446298 240 ntBASIC26.69■■□□□ 1.86
RTL1A6NKG5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RTL1A6NKG5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RTL1A6NKG5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RTL1A6NKG5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RTL1A6NKG5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RTL1A6NKG5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
RTL1A6NKG5 MMP23A-201ENST00000234610 1017 ntBASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms