Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 AC010536.3-201ENST00000620306 533 ntBASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV9S1A1TA0A576 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV9S1A1TA0A576 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV9S1A1TA0A576 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.15■□□□□ 0.82
TCRBV9S1A1TA0A576 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.15■□□□□ 0.82
TCRBV9S1A1TA0A576 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV9S1A1TA0A576 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.15■□□□□ 0.82
TCRBV9S1A1TA0A576 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TCRBV9S1A1TA0A576 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.15■□□□□ 0.82
TCRBV9S1A1TA0A576 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV9S1A1TA0A576 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV9S1A1TA0A576 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV9S1A1TA0A576 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.14■□□□□ 0.82
TCRBV9S1A1TA0A576 AP000974.1-201ENST00000623909 2387 ntBASIC20.14■□□□□ 0.82
TCRBV9S1A1TA0A576 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV9S1A1TA0A576 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.14■□□□□ 0.81
TCRBV9S1A1TA0A576 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.14■□□□□ 0.81
TCRBV9S1A1TA0A576 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV9S1A1TA0A576 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.14■□□□□ 0.81
TCRBV9S1A1TA0A576 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.14■□□□□ 0.81
TCRBV9S1A1TA0A576 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV9S1A1TA0A576 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.14■□□□□ 0.81
TCRBV9S1A1TA0A576 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV9S1A1TA0A576 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV9S1A1TA0A576 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV9S1A1TA0A576 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TCRBV9S1A1TA0A576 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 AC016405.3-201ENST00000607710 860 ntBASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TCRBV9S1A1TA0A576 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 AL162412.1-201ENST00000567129 965 ntBASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 AC009237.14-201ENST00000609975 1594 ntBASIC20.12■□□□□ 0.81
TCRBV9S1A1TA0A576 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TCRBV9S1A1TA0A576 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBV9S1A1TA0A576 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms