Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUXBA0A1W2PPF3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 PGM5P4-201ENST00000421970 445 ntBASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 AL354811.1-201ENST00000610286 706 ntBASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 AC243732.1-201ENST00000612648 864 ntBASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 AL355001.2-201ENST00000620617 1191 ntBASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.32■□□□□ 0.2
DUXBA0A1W2PPF3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
DUXBA0A1W2PPF3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUXBA0A1W2PPF3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.29■□□□□ 0.2
DUXBA0A1W2PPF3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUXBA0A1W2PPF3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.29■□□□□ 0.2
DUXBA0A1W2PPF3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
DUXBA0A1W2PPF3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
DUXBA0A1W2PPF3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUXBA0A1W2PPF3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUXBA0A1W2PPF3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
DUXBA0A1W2PPF3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.29■□□□□ 0.2
DUXBA0A1W2PPF3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUXBA0A1W2PPF3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUXBA0A1W2PPF3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUXBA0A1W2PPF3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUXBA0A1W2PPF3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms