Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CENPVL3A0A0U1RRI6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CENPVL3A0A0U1RRI6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CENPVL3A0A0U1RRI6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 Z99916.2-201ENST00000604037 246 ntBASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CENPVL3A0A0U1RRI6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.24■□□□□ 0.19
CENPVL3A0A0U1RRI6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 AL121906.2-201ENST00000621597 723 ntBASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.23■□□□□ 0.19
CENPVL3A0A0U1RRI6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.22■□□□□ 0.19
CENPVL3A0A0U1RRI6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CENPVL3A0A0U1RRI6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CENPVL3A0A0U1RRI6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CENPVL3A0A0U1RRI6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CENPVL3A0A0U1RRI6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms