Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 AC006015.1-201ENST00000429970 570 ntBASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 DUX4L16-201ENST00000555130 1264 ntBASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 RARRES2P6-201ENST00000567333 442 ntBASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 AC069236.1-201ENST00000604339 616 ntBASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 AC011767.1-201ENST00000617410 1153 ntBASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 AL691432.2-201ENST00000607222 2038 ntBASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-8A0A0A6YYG3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 AC068338.2-201ENST00000563278 1430 ntBASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 AC026271.2-201ENST00000428091 497 ntBASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 CNN2P6-201ENST00000439038 900 ntBASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 BID-214ENST00000617586 542 ntTSL 5 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 AC008694.1-202ENST00000636953 945 ntBASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 TMEM179-206ENST00000616017 1645 ntBASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-8A0A0A6YYG3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 AC231657.2-201ENST00000624556 255 ntBASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
TRBV6-8A0A0A6YYG3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms