Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 MIR638-201ENST00000385237 100 ntBASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 CDV3P1-201ENST00000471403 739 ntBASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-7A0A0A0MS04 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 AC005082.1-201ENST00000413042 2259 ntBASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-7A0A0A0MS04 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 KRT19P1-201ENST00000405746 1186 ntBASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 AC097381.1-201ENST00000429019 1296 ntBASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms