Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 DUX4L13-201ENST00000554103 1267 ntBASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 DUX4L15-201ENST00000611059 1267 ntBASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 DUX4L23-201ENST00000615195 1269 ntBASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 DUX4L24-201ENST00000617576 1269 ntBASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 DUX4L22-201ENST00000618238 1269 ntBASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 DUX4L20-201ENST00000619712 1269 ntBASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 DUX4L21-201ENST00000622058 1269 ntBASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 DUX4L10-201ENST00000622460 1267 ntBASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 DUX4L25-201ENST00000624915 1269 ntBASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 AC099398.1-201ENST00000567919 2776 ntBASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.4□□□□□ -0.27
TRBV20-1A0A075B6N2 AC141586.5-201ENST00000624546 2050 ntBASIC13.4□□□□□ -0.27
TRBV20-1A0A075B6N2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 TMEM179-206ENST00000616017 1645 ntBASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 AL157400.5-201ENST00000507624 621 ntBASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 TNRC18P3-201ENST00000441896 2691 ntBASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 AC139713.2-201ENST00000641328 2723 ntBASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 AC009113.1-201ENST00000570267 2443 ntBASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV20-1A0A075B6N2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 ECEL1P2-201ENST00000461596 1295 ntBASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 AC068880.1-201ENST00000507289 2297 ntBASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 REST-210ENST00000638187 1334 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV20-1A0A075B6N2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV20-1A0A075B6N2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms