Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 AC061975.3-201ENST00000583209 244 ntBASIC8.12□□□□□ -1.11
PGBD4Q96DM1 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 AC024085.1-201ENST00000604299 432 ntBASIC8.12□□□□□ -1.11
PGBD4Q96DM1 AL078624.2-201ENST00000605063 554 ntBASIC8.12□□□□□ -1.11
PGBD4Q96DM1 Z93930.3-201ENST00000607919 749 ntBASIC8.12□□□□□ -1.11
PGBD4Q96DM1 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 uc_338.37-201ENST00000620113 186 ntBASIC8.12□□□□□ -1.11
PGBD4Q96DM1 AL121985.3-201ENST00000620690 523 ntBASIC8.12□□□□□ -1.11
PGBD4Q96DM1 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 HYDIN2-203ENST00000614586 13885 ntBASIC8.12□□□□□ -1.11
PGBD4Q96DM1 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AC011379.1-201ENST00000508713 3025 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 RN7SKP36-201ENST00000363997 312 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 RNA5SP302-201ENST00000364896 100 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 NPM1P31-201ENST00000399021 764 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AL590143.1-201ENST00000405071 138 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 MTND2P11-201ENST00000423638 648 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 MTND1P10-201ENST00000426108 832 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AL512637.1-201ENST00000439523 1231 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 SS18L2P1-201ENST00000445923 213 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 RPL5P16-201ENST00000471467 790 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AC015820.1-201ENST00000473882 321 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 RN7SL152P-201ENST00000484176 298 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 NPY6R-201ENST00000503807 1112 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AC068790.1-201ENST00000536166 355 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AC084033.1-201ENST00000550830 633 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AC016405.2-201ENST00000607393 312 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AC012510.1-201ENST00000607946 759 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AL121985.2-201ENST00000621192 555 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 TEX41-279ENST00000629149 609 ntTSL 5 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 AC243725.1-201ENST00000637164 436 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 PHF2P2-202ENST00000444553 2865 ntBASIC8.11□□□□□ -1.11
PGBD4Q96DM1 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PGBD4Q96DM1 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 AC007923.2-201ENST00000584218 1591 ntBASIC8.1□□□□□ -1.11
PGBD4Q96DM1 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 AC104581.5-201ENST00000624171 7141 ntBASIC8.1□□□□□ -1.11
PGBD4Q96DM1 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 SAMMSON-203ENST00000641005 2168 ntBASIC8.1□□□□□ -1.11
PGBD4Q96DM1 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 AC023886.2-201ENST00000321285 411 ntBASIC8.1□□□□□ -1.11
PGBD4Q96DM1 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 RNA5SP238-201ENST00000365464 120 ntBASIC8.1□□□□□ -1.11
PGBD4Q96DM1 RNU1-122P-201ENST00000365538 156 ntBASIC8.1□□□□□ -1.11
PGBD4Q96DM1 NXT2-204ENST00000372107 937 ntTSL 3 BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 SOD1P1-201ENST00000407803 440 ntBASIC8.1□□□□□ -1.11
PGBD4Q96DM1 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PGBD4Q96DM1 MEAF6P1-201ENST00000416092 327 ntBASIC8.1□□□□□ -1.11
PGBD4Q96DM1 MTND2P9-201ENST00000422293 931 ntBASIC8.1□□□□□ -1.11
PGBD4Q96DM1 CYP4F34P-201ENST00000425951 481 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms